Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0338 ATGGATGTGTTGAAAACATTGGCTGCTGAAAAGCCTGTGGTGGTCTTCAGCAAGAGCAATTGTGACATGATCCACTCAGTGAAGGCTCTCATAATAGGCTTTGGTACCTACCCTGAAGTTATTGAGATTGACAAAATGCCAAATGGGCAGCAACTAGAGAGAGCACTGATTCAGCTAGGTAGCCGCCCGAGCGTGCCTGCGGTGTTCATAGGACAGCAATTTATAGGTGGAGCTGATGAACTCTTAATCCTCAATGTTCAGAACAAGCTTGCCCCATTGCTTCTAAGAGCTGGAGCTATCTTTCTCTGGAGCGAGTAG 318 0.4686 MDVLKTLAAEKPVVVFSKSNCDMIHSVKALIIGFGTYPEVIEIDKMPNGQQLERALIQLGSRPSVPAVFIGQQFIGGADELLILNVQNKLAPLLLRAGAIFLWSE* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0338 105 Gene3D Glutaredoxin 2 102 - -
Lja1g0338 105 Pfam Glutaredoxin 13 75 IPR002109 -
Lja1g0338 105 PANTHER GLUTAREDOXIN 1 104 IPR011905 -
Lja1g0338 105 SUPERFAMILY Thioredoxin-like 2 100 IPR036249 -
Lja1g0338 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lja1g0338 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lja1g0338 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lja1g0338 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lja1g0338 105 CDD GRX_GRXh_1_2_like 12 93 - -
Lja1g0338 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Lja1g0338 105 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0338 Lja-Chr1 2949133 2949450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0338 1 102 Miscellaneous Gene Families AT4G15690 45.098 3.44e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0338 K03676 - gmx:100803979 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0338 1 2949133 2949450 Lja1g0338 1 2949133 2949450 ECH
Lja5g1142 5 11505476 11505763 Lja1g0338 1 2949133 2949450 PCT