Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0334 ATGGATAGAGTAAAGGATTTGGCTTCAAAGAAGGCTGCTGTTATATTTACAAAGAGTTCATGTTGCATGTGCCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCTGCAGTGCATGAGCTTGATAATGAGTCTTATGGGAGGGAAATGGAGTGGGCTTTGAGGGGTCTGGGATGTAACCCTTCGGTCCCAGCAGTGTTCATTGGCGGAAAATTTATTGGCTCGTCAAAAGACGTGATATCCCTCCATGTTGATGGATCTCTGAAGCAAATGCTCATGGATGCAAAGGCCATCTGGTTTTAG 309 0.4531 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNESYGREMEWALRGLGCNPSVPAVFIGGKFIGSSKDVISLHVDGSLKQMLMDAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0334 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lja1g0334 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lja1g0334 102 Gene3D Glutaredoxin 1 101 - -
Lja1g0334 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lja1g0334 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lja1g0334 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lja1g0334 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lja1g0334 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lja1g0334 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lja1g0334 102 CDD GRX_GRXh_1_2_like 12 93 - -
Lja1g0334 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0334 Lja-Chr1 2928656 2928964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0334 1 102 Miscellaneous Gene Families AT4G15700 50.000 2.86e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0334 K03676 - gmx:100819447 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0334 1 2928656 2928964 Lja1g0334 1 2928656 2928964 ECH
Lja1g0334 1 2928656 2928964 Lja5g1139 5 11476356 11476840 PCT