Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0122 ATGGAAAGAAGAGAAAAGGGTGTGGAGAGAGATAAGAAAAGTGAAGGACTAATGGTGGAAAAGTTGAAAATTGGATGTGTTGTGGGGAAAAGAAGAGACCCTTCAACTCCACCACCCACTTGGAGACTTGAGTTTCCATCTCATAGTAGCACCAAAAACCAGGTTCAAGAGTTCCTCAACTTTCCCACTTCAGCACTCTCTGCCAGAAACCTCTGTGCCAAACTCTGGGAAATTCAGCCCCACCAATTGGCCCCTCTTGCCAAAATGAGAACCAGCCTTCGCCGCCGCCACGCCCACCATTGTAGGGACACAATTTATGAGCCAGCAGCTGCAAGAGGCTTGAGAAGACATGTCAAAGAATCACCTGTTCAGCACCATAGATCAGTTGAAAGAAATAATTGTGCTCTACAGAATGTATCTCCTGCTAGTTACACTAGCTCAGTGGAAGTGAGACCATATAATCATGTAAACCCTACAAGTTCCTCAGACTTCAAGGGTAGGGTTGGAGAGTCAAGTTGCAATCCTAAAACATCCAGAGAGTTATTCAAGGTACTCGACCGAATCTGGTGTCTTGAAGAACAGCATGCGTCAGATAAAGCAACAGTGAAAGCCCTGAAAATGGAAGTGGATCTCTCCCGGGCACGAGTTAAAGACTTACTACAAGAAAATAAAATTAATAAGCAGGCAATGGAGAAGTTGATAAAGAAACTAACAGAGGACAAGCTTGTTAGGAAGAGCAATGAACATGTTAAAATTAAAGCTGCAGTTCAATCAATCAAGGAAGAGATACAAGATGAAAAGAGGTTAAGAAAACATTCAGAAAGCCTGCACAGGAAACTGGTTAGGGAGCTGTCTGAAGTAAAGTCTTCATTCTGTAGTTCTCTAAGAGATCTTGAAAGCGAGAGAAAAGCACGGATCGTTTTGAAGAATTTGTGTGATGATTTTGCCAAAGGAACAAGAGATTATGAACATGAGGTACATTCGCTTATGCATAGTGTTGAGAAGGGTCAGGTTAAAGGGGATTGTCGCCTTCGTATTTCAGAAGCTTGGCTTAATGAGCGGAAGAAAATGAAGCTAGTTCAAGCTAGCAGTGATCTCACTGACAGAGATTCAATAATTGACAAATTAGGTGTTGATATTGAAACATATCTTCTGGCAATGAGTTCTGTTAACTTGAGAAGATGTGGTAATTCCTCCACAAAGGAGCTAAAGGAAATTTACCCTTACCTGGATTCATTGGATTCCTTTCCACTAAAGGAGACCATAAGTGCACCTCATAATACAGTTGGGGAAGACTCGATCGGTACCGACATTTTTGATCTGAAAAGGACTGCTGATGAAGAAGGACTTGACAAACTCAGCCACAGACTTCACAGCAATAATAATGCAAATGTCCGTAAAGAAAAGAAGGGAAGCCACAGTTCAGTGAAAAAACAAGTTCAGCCAAAAGAAATCATTCTGCTAACAATCACGGACAAGAACATGTCATGTGATGAAAATGAGAGGGTGTTTGTTGAGAGGAAATCAAGTGAAATTGGAGGGAACAGAAGCACAATTCTATTAAATGCCCCGCCTGGGGTATCAGCAATACAAGGTCCACCAGAAAGTGATAGGACCTGGACCAAGAGAATAAATTCAGGTCACATGCTTGACAACCTAGTTGGAAACAGTTCTTTGTCATCAGAAGGTGATAAGGTTTTTACCGAGAGTATTTGCAGGGAAGAATCTTGTGTCCATTCTGCAGTTATAGGTAATAGTAGTCCTGTAAAGCAGTGGAAACCTATTTTGGTTGTCGCAGATTTTAACCAGTATGAGTCTTCTCCCAAATTGCATAGGAGGGAAGTAAAGGACAACAAATTGATGGCAAAACTGCTTGAAGCAAGGTTAGAGGAGCAGAGATGTCGCTCTAAAGCTAACAAAAGCTCTTTTTGTTCAGCTGATGAGAGCATTGGATTGTGA 1959 0.4165 MERREKGVERDKKSEGLMVEKLKIGCVVGKRRDPSTPPPTWRLEFPSHSSTKNQVQEFLNFPTSALSARNLCAKLWEIQPHQLAPLAKMRTSLRRRHAHHCRDTIYEPAAARGLRRHVKESPVQHHRSVERNNCALQNVSPASYTSSVEVRPYNHVNPTSSSDFKGRVGESSCNPKTSRELFKVLDRIWCLEEQHASDKATVKALKMEVDLSRARVKDLLQENKINKQAMEKLIKKLTEDKLVRKSNEHVKIKAAVQSIKEEIQDEKRLRKHSESLHRKLVRELSEVKSSFCSSLRDLESERKARIVLKNLCDDFAKGTRDYEHEVHSLMHSVEKGQVKGDCRLRISEAWLNERKKMKLVQASSDLTDRDSIIDKLGVDIETYLLAMSSVNLRRCGNSSTKELKEIYPYLDSLDSFPLKETISAPHNTVGEDSIGTDIFDLKRTADEEGLDKLSHRLHSNNNANVRKEKKGSHSSVKKQVQPKEIILLTITDKNMSCDENERVFVERKSSEIGGNRSTILLNAPPGVSAIQGPPESDRTWTKRINSGHMLDNLVGNSSLSSEGDKVFTESICREESCVHSAVIGNSSPVKQWKPILVVADFNQYESSPKLHRREVKDNKLMAKLLEARLEEQRCRSKANKSSFCSADESIGL* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0122 652 Coils Coil 202 240 - -
Lja1g0122 652 MobiDBLite consensus disorder prediction 457 477 - -
Lja1g0122 652 MobiDBLite consensus disorder prediction 457 478 - -
Lja1g0122 652 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 3 642 - -
Lja1g0122 652 PANTHER GB|AAF24581.1 3 642 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0122 Lja-Chr1 1027229 1030363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0122 - - pvu:PHAVU_006G109400g 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0122 1 1027229 1030363 Lja1g0122 1 1027229 1030363 ECH
Lja1g0122 1 1027229 1030363 Lja3g1823 3 20628351 20633983 PCT