Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0103 ATGGTGAGTGGAATGCGGTGTGATTTGAACCACAGCCATTTCTTCCTCAAGTTTGCAGTGTCATGTCTCTTTCTGGGTCTCGCTTTCCGCCTCCTCTTCACGGGCTCGTTAACCTTGTTATCTGTGCTGCTGCACAATACTCCTCCTCTTGATCAAAATGCAGTAGCAGAGTCTCCCTTGTTTTCTCTTCCCTCTCTGAAACCTCATGATTCTGTTGATTTTCCTGGAAACCACAGCCAAACCTCTCCAAAAGATGCAGAAAAATGTGATCGTTTTGTGGGAGATTGGGTGAGGGACCAATCTGGTCCATTGTACACAAATGAGAGCTGCCATATGATTGAAGGTCATCAAAATTGCATGAGAAATGGACGCACTGATTTGGAGTACCTTCACTGGAGGTGGAAGCCAAGGGGCTGTGAATTACCCAAGTTTAGTCCTCAGAAATTTCTTGCTATTATGAGGCATAAATCATTTGCCTTCATTGGTGATTCCATCTCCAGGAACCATGTCCAATCGCTAATTTGTATTCTCTCACAGGTAGAAGCAGCTGATGAGGTGTACCATGATGAGGAATACAGATCAAAGATATGGAAGTTCCCTTCCCACAACTTCACACTCTCAGTGATATGGTCCCCTTTCCTCCTCAAATCAGATATATTTGAGGACATGAATGGAGTTTCCTCCTCAGAAATAAACCTTTATCTTGACATTCTGGACAACAATTGGACCAATCAATACAAGAATTTTGATTATGTTGTGATTGCTGGTGGAAAATGGTTCCTCAAGACAGCAATATACCATGAAAACAACACAGTAACTGGCTGCCATTACTGCCCTGGAAAGAATCTAACAGAGCTAGGATTTGACTATGCGTACCGTAAAGCAATGGAGCTTGTTTTTTATTTCATGGCAACAAACTCTAACCACAAGGCAATAGTTTTTTTCAGAACCAGTACTCCAGATCACTTTGAGAATGGGGCTTGGTTCAGTGGAGGATATTGCAATAGGACAGTGCCCTTCAAAGAGGGTGAAGTAGAAATGAGTTATGTAGATTCTGTCATGAGAGGTATTGAAATTGAAGAGTTTGACAAGGCTGAAAGGTCCCTAGGTTCAAACTTGAGACTCTTGGACACAACTACACTCTCATTGTTGAGACCTGATGGGCATCCGGGGCCATATAGAGAGTTAGATCCATTTGCGAAGGCTAAATTGCAGAATGATTGTCTTCATTGGTGTTTGCCAGGACCAATTGACTCCTGGAATGACATATTAATGCAAATGCTGTGA 1287 0.4258 MVSGMRCDLNHSHFFLKFAVSCLFLGLAFRLLFTGSLTLLSVLLHNTPPLDQNAVAESPLFSLPSLKPHDSVDFPGNHSQTSPKDAEKCDRFVGDWVRDQSGPLYTNESCHMIEGHQNCMRNGRTDLEYLHWRWKPRGCELPKFSPQKFLAIMRHKSFAFIGDSISRNHVQSLICILSQVEAADEVYHDEEYRSKIWKFPSHNFTLSVIWSPFLLKSDIFEDMNGVSSSEINLYLDILDNNWTNQYKNFDYVVIAGGKWFLKTAIYHENNTVTGCHYCPGKNLTELGFDYAYRKAMELVFYFMATNSNHKAIVFFRTSTPDHFENGAWFSGGYCNRTVPFKEGEVEMSYVDSVMRGIEIEEFDKAERSLGSNLRLLDTTTLSLLRPDGHPGPYRELDPFAKAKLQNDCLHWCLPGPIDSWNDILMQML* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0103 428 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 141 427 IPR026057 GO:0016740
Lja1g0103 428 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 62 428 IPR029962 GO:0016413
Lja1g0103 428 Pfam PMR5 N terminal Domain 87 140 IPR025846 -
Lja1g0103 428 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 62 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0103 Lja-Chr1 855911 857633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0103 - - gmx:100795653 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0103 1 855911 857633 Lja1g0103 1 855911 857633 ECH
Lja1g0103 1 855911 857633 Lja3g1792 3 20222388 20225201 PCT