Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0143 ATGGGTTCCGAAGGATCTGCGGTTGTTGTACCCAGGAGTTTCAGATTATTGGAAGAGCTTGAAAGAGGTGAAAAGGGAATCGGTGATGGAACTGTTAGCTATGGCATGGATGATGCTGATGACATACACATGCAGTCATGGACAGGGACTATTATCGGTCCCCCTGGTACCGTTCATGAAGGGCGTATCTACCAGTTGAAGTTGTTCTGTGGCAAGGATTATCCAGACAATCCACCATCTGTAAGATTTCAAACAAGGATTAACATGACTTGTGTCGACCAAGATACTGGAGTGGTTGAGCCACATTTGTTTCCCATGCTGGCTAATTGGCAGCGAGAGCATACAATGGAGGACATTCTGATGCAATTGAAGAAGGAAATGCTGTCTCCTCAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGTAACGAAGATGGCAGGATTGATCAAAAGGGGCTGGTGCTCAAATGTTGTATCATGTAG 480 0.4583 MGSEGSAVVVPRSFRLLEELERGEKGIGDGTVSYGMDDADDIHMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVDQDTGVVEPHLFPMLANWQREHTMEDILMQLKKEMLSPQNRKLAQPPEGNEDGRIDQKGLVLKCCIM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0143 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Lele56g0143 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Lele56g0143 159 Pfam Ubiquitin-conjugating enzyme 40 135 IPR000608 -
Lele56g0143 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Lele56g0143 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Lele56g0143 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 133 - -
Lele56g0143 159 SMART ubc_7 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0143 Lele-ChrLele56 1337327 1339794 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1332 53 21602353 21607309 Lele56g0143 56 1337327 1339794 hybridization
Lele54g1308 54 18219890 18222362 Lele56g0143 56 1337327 1339794 hybridization