Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1332 ATGGGTTCCGAAGGATCCGCGGTTGTTGTACCCAGGAGTTTCAGGTTATTGGAAGAGCTTGAAAGAGGTGAAAAGGGAATCAGTGATGGAACTGTCAGTTATGGTATGGATGATGCTGACGATATATACATGCAGTCATGGACAGGGACTATTATCGGCCCCCCTGGTACTGTTCATGAAGGGCGTATCTACCAGTTGAAATTGTTCTGTGGCAAGGATTATCCGGACAATCCACCATCTGTAAGATTTCAAACAAGGATTAACATGACTTGTGTTAACCAAGATACCGGAGTGGTTGAGCCACATCTGTTTCCCATGCTGGCTAATTGGCGGCGAGAGTATACAATGGAAGACATTCTGATGCAATTGAAGAAGGAAATGCTGTCTCCTCAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGTAACGAAGATGGCAGGATTGATCAAAAGGGGCTGGTGCTCAAATGCTGTATCGGAAAATGTCCTTCTCTGTTGCTACCAATTGAAGTGAGAAATATCCAGAGAGCCAAGCATGGGAGTGACACCGGAGTCTATGATTCTCAGGGAAGGTTTGTTGCTTTGAAGTTCGAAGAAATATTCAGGAAGCATGCAAGAAGCCACCCAGATGCTTTAACATCACATGAACTGGACGCCATGCTTAAAGCAAACAGAGTTCCTAAGGATTACTCTGGCTGGGTTGGTGCCTACGCAGAGTGGAAGCTGTTATATTATCTGTGCAAAGACAAGAATGGGTTACTGCACAAAGACACAGTGAAAGCTGTTTATGATGGCACCTTGTTTCATCAAATGGAAAAGGACCACTCTTCCCGCAGCACCCTCTAA 843 0.4531 MGSEGSAVVVPRSFRLLEELERGEKGISDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQDTGVVEPHLFPMLANWRREYTMEDILMQLKKEMLSPQNRKLAQPPEGNEDGRIDQKGLVLKCCIGKCPSLLLPIEVRNIQRAKHGSDTGVYDSQGRFVALKFEEIFRKHARSHPDALTSHELDAMLKANRVPKDYSGWVGAYAEWKLLYYLCKDKNGLLHKDTVKAVYDGTLFHQMEKDHSSRSTL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1332 280 SMART ubc_7 14 162 - -
Lele53g1332 280 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 167 IPR000608 -
Lele53g1332 280 PANTHER PEROXYGENASE 3-RELATED 158 276 IPR007736 -
Lele53g1332 280 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Lele53g1332 280 SUPERFAMILY UBC-like 9 142 IPR016135 -
Lele53g1332 280 Pfam Ubiquitin-conjugating enzyme 36 134 IPR000608 -
Lele53g1332 280 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Lele53g1332 280 Pfam Caleosin related protein 156 270 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1332 Lele-ChrLele53 21602353 21607309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1332 151 279 Acyl Lipid Metabolism Gene Families AT1G70670 62.791 3.75e-54 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1332 53 21602353 21607309 Lele56g0143 56 1337327 1339794 hybridization