Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0972 ATGGGAAAGAGAAACTCCTTGATAGTTTTATCTTCGGACGATGAAGATGATGGTACTACTTGTTCTTTGAGTGCGAGTACTAGCTATGCGAAGTCTAAGTCAAGGTCAACAAGCACCAGAGGAAAGAAGAAGGCCCGCCTTTCAGGTTCTCGGTCTCGAAGGTCCAAAGATTCCGGCAAGTTGCATGAGATCAACCAACTTGGGGAAGACTTCAACGAAGTGTTTACTGGGTTCGATGTATCTGCTGGCACACGAAGGAGCTATTCAGGGGAGCCATGGGTTGATAGACACAAGCCCCATTCTCTGGAAGAGCTTGCTGTTCACAAAAAAAAGGTTGAAGAAGTTAAGATGTGGTTTGAGCAAAGGTTAAAACCTTCTAAGGGTGTCTGCAGCAATAATGTTCTTCTCATCAATGGGCAGGCTGGAGTTGGAAAATCTGCTGCAGTTCATGTAATTTCTTCTCACCTTGGAGCTATTCTGTGTGAATGGAATACACCTACACCTGTAACTTGGCAAGAGCACCTACATAATTCTAGTTCAGGGACACAATACACATCCAAGTTGGATGAATTTGAAACTTATGTTGAAAGAATAAGGAAATATGGCTTATTGTCAACTTATTTGAATGGGGAATCAAAAGCACCCATCATAGTTTTAATTGATGATCTTCCTGTGGCAAATGGGAAAGCTGCTTTTGGACGACTACAAGATTGCTTGCACCTGTTGGTGCGCTCAACTCAGTTTCCCACAGTTATAGTGTTCACAGACTATGGTAATGCTGATTCAGCAGACCATGATGCACAATGCTTGGAAAAAATTCAGCTATCTCTTCAGAGTGCTGGGGCCTGTAAGGTTACTTCTTTGGAAAGTTCCCTTCTGGCTTTTGATTTTTTGTTATGTGATAGTACTTATTCTAAATTTAATATGATAAACTGTCAGATCCCATTCAATCCTATTACAATGAATTCTATCAAGAAGGTACTTTTTAGAATATGCCAACTAGAGCAGTGTGATGTGACTGCTGAAGATGTTAATCTGATTGCTAAAGCTAGTGGTGGTGACATCAGGCATGCGATCACATCATTGCAGTTCTTCTGTCTTCAACAGAATCAAGTGCATTCTTTGTCTCCATCCAGTAACTTTCTAAGTGTATCAAAAAAGAAAGAAAAGAAGGCTGTCGCTTTAGATGATGGCTATTCCTTGCACTTTAGCAGAGATGAGACACTATCTTTATTTCATGCCTTGGGGAAATTTTTGCACAACAAAAGAGAGTCTGAAAGTGCAACCAAGTGTGTGCTAGATTTCATGAATGAGGAGGCAATTGATGATGCGTGGATAGTGTCTTCATATCTAGGTGATGCTGACATTCTTGCTAAATTTCGAGGAATAGCATCTAGATATAATGAGGCAGAGGGTGTTCTACCATCAGCTGCTGCTTCTGTTGCTGTTCGTGGCGTATTATTTGGAAATTCTCATACACTATCCAGGTGGCATGCTGTGCGGGGCCCAAAACTGTGGGGGGTTGAGAGGGAATTATCATACAACAAGAATAAGATGCTCAAGCAGCAAGTTGCAGAGTTTGAAGGGTTGACTTCTTGCAATAAATCAGTTATGGTCACAGAGTACATGCCCGTGTTAAAATGGCTTGGAAATAGGGCACGCAGTGAATATCGTGGATCTCCTCAGTTATCGGTGCACGACATGGATATGGAAGGTATTGATTTGGACCAAATGATTTTAGATGACCAAGAAAATGAAGACGAGATAGAAGATTGGTAG 1779 0.4143 MGKRNSLIVLSSDDEDDGTTCSLSASTSYAKSKSRSTSTRGKKKARLSGSRSRRSKDSGKLHEINQLGEDFNEVFTGFDVSAGTRRSYSGEPWVDRHKPHSLEELAVHKKKVEEVKMWFEQRLKPSKGVCSNNVLLINGQAGVGKSAAVHVISSHLGAILCEWNTPTPVTWQEHLHNSSSGTQYTSKLDEFETYVERIRKYGLLSTYLNGESKAPIIVLIDDLPVANGKAAFGRLQDCLHLLVRSTQFPTVIVFTDYGNADSADHDAQCLEKIQLSLQSAGACKVTSLESSLLAFDFLLCDSTYSKFNMINCQIPFNPITMNSIKKVLFRICQLEQCDVTAEDVNLIAKASGGDIRHAITSLQFFCLQQNQVHSLSPSSNFLSVSKKKEKKAVALDDGYSLHFSRDETLSLFHALGKFLHNKRESESATKCVLDFMNEEAIDDAWIVSSYLGDADILAKFRGIASRYNEAEGVLPSAAASVAVRGVLFGNSHTLSRWHAVRGPKLWGVERELSYNKNKMLKQQVAEFEGLTSCNKSVMVTEYMPVLKWLGNRARSEYRGSPQLSVHDMDMEGIDLDQMILDDQENEDEIEDW 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0972 592 CDD HLD_clamp_RFC 319 372 - -
Lele55g0972 592 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 432 558 IPR004582 GO:0006281
Lele55g0972 592 MobiDBLite consensus disorder prediction 1 60 - -
Lele55g0972 592 Gene3D - 91 272 IPR027417 -
Lele55g0972 592 MobiDBLite consensus disorder prediction 36 50 - -
Lele55g0972 592 Gene3D - 322 376 - -
Lele55g0972 592 MobiDBLite consensus disorder prediction 12 35 - -
Lele55g0972 592 Pfam Rad17 P-loop domain 90 260 - -
Lele55g0972 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 371 IPR027417 -
Lele55g0972 592 FunFam RAD17 checkpoint clamp loader component 90 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0972 Lele-ChrLele55 7351591 7356692 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0972 55 7351591 7356692 Lele55g0972 55 7351591 7356692 ECH
Lele54g0539 54 11823976 11829279 Lele55g0972 55 7351591 7356692 hybridization