Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0815 ATGAGAAGCATGAATGGGATTTTGGCTGTGTTTATTATTTGCTTTCTGGTTGCAACTTGTTTTGGAGAAGAAGAGCTTGAAGTGGCTCCAATGGAGAAGAGAGAGCTTGAAGCTCTATACTCAACCATACAAGGCTTCGTTGGAAATTGGTGGAATGGCTCGGATCTCTATCCGGATCCTTGTGGGTGGACTCCAATTCAGGGTGTCTCTTGTGATTTATTTAATGGGTTTTGGTATGTTACTGCCTTGAACATTGGACCCATCCATGAAAATTCTCTATCTTGTTCCCAGAAAAAGTTAGAATTTAGGCCTCAGTTGTTTGAGTTCAAGCACCTAGAATCTCTAACCTTCTTCAACTGTATTCTATCAAGAGACAAGCATTCAGTTACTATCCCAACTGGAAACTGGGAGGAACTTTCTGGAAGCCTAGAATCACTTGAGTTTCGATCAAACCCAGGTCTCATTGGAAAAATCTCACCAAGTTTTGGTCTCCTTAAGAACCTCAAATCTCTGGTATTACTAGGAAATGGTTTAACAGGTGAAATACCACCAGACATTGGCAACCTTATCAAACTGAAAAGACTTGTTCTTTCAGAGAACTCAATCAGTGGGAAGATTCCAGATATTTTCAGTGGGTTGAGTGATTTACTGATATTGGATTTGAGTAGAAATGCACTTTCTGGGTCTTTGCCTTTATCTCTTGGACACTTAACTTTACTATTGAAGCTTGATGTAAGCAACAATAAATTAGAAGGAAATCTGCTAAAGGGGTTTGGTAATCTCAAGAATCTGACCCTAATGGACCTAAGAAACAACAGATTCCAAGGTGGATTGGTGTTGTCTATTCAAGAGATGATTTCCTTAGAAGAATTGGCGTTATCCAACAATCCAATTGGTGGAGGAATCAGTGTCTTAAAGTGGGAAAATCTTCAGAACTTGGTCATTTTGGAACTCTCTGACATGGGATTGACAGGGGAGATTACAGAGACCATAACAGAGTTGAAGAGATTGAGGTTTTTGGGTCTTCGGAACAATTTCCTTACAGGAAACCTTACACCAAAGCTAGAAACTTTGCCTTGTCTCAATGCTTTGTACCTAAGTGGAAACAATCTGACAGGTGACCTTAAATTCTCCGAACAGTTTTATGGCAAAATGGGGAGCCGTTTTGGGGCCTGGGATAATCCTTACCTTTGTTACCCAGTTGGAGAAATATCTACAAGACAAGTCCCATTTGGGGTAAGACCATGCAATCAAGAGGTCAACAACTTGCTTGAAAATGATTCAAAAACATAA 1293 0.3998 MRSMNGILAVFIICFLVATCFGEEELEVAPMEKRELEALYSTIQGFVGNWWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTALNIGPIHENSLSCSQKKLEFRPQLFEFKHLESLTFFNCILSRDKHSVTIPTGNWEELSGSLESLEFRSNPGLIGKISPSFGLLKNLKSLVLLGNGLTGEIPPDIGNLIKLKRLVLSENSISGKIPDIFSGLSDLLILDLSRNALSGSLPLSLGHLTLLLKLDVSNNKLEGNLLKGFGNLKNLTLMDLRNNRFQGGLVLSIQEMISLEELALSNNPIGGGISVLKWENLQNLVILELSDMGLTGEITETITELKRLRFLGLRNNFLTGNLTPKLETLPCLNALYLSGNNLTGDLKFSEQFYGKMGSRFGAWDNPYLCYPVGEISTRQVPFGVRPCNQEVNNLLENDSKT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0815 430 FunFam Piriformospora indica-insensitive protein 2 34 206 - -
Lele55g0815 430 Pfam Leucine rich repeat 191 250 IPR001611 GO:0005515
Lele55g0815 430 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 37 377 - -
Lele55g0815 430 FunFam Piriformospora indica-insensitive protein 2 207 304 - -
Lele55g0815 430 Gene3D Ribonuclease Inhibitor 88 408 IPR032675 -
Lele55g0815 430 SUPERFAMILY L domain-like 139 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0815 Lele-ChrLele55 5546087 5548163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0815 142 417 Receptor kinase-like Gene Family AT4G08850 31.159 2.32e-24 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0671 53 16887178 16889261 Lele55g0815 55 5546087 5548163 hybridization
Lele54g0683 54 13754368 13756276 Lele55g0815 55 5546087 5548163 hybridization