Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0683 ATGAAAAGCATCAATGGGATTTTGGTTCTGTTTATTATTTGCTTTCTGGGTGCAACTTATTGTTTTGGAGAAGAGCTTGAAGTGGCTCCAATGGAGAACAGAGAGCTTGAAGCTCTATACTCAACCATACAAGGCTTCGTTGGAAATTGGTGGAATGGCTCAGATCTCTATCCGGATCCTTGTGGGTGGACTCCAATTCAGGGGGTCTCTTGTGATCTATTTAATGGGTTTTGGTATGTTACTGCCTTGAACATTGGACCCATCCATGAAAATTCTCTATCTTGTTCCCAGAAAAAGTTGGAATTTAGGCCTCACTTGTTTGAGTTCAAGCATCTAGAATCTCTAACCTTCGTCAACTGTTTACTATCAAGAGACAACAAGCATTCAGTTACCATCCCAACTGGCTGGGGGGAACTTTCTGGAAGCCTTGAATCACTTGAGTTTCGATCAAACCCAGGTCTCATAGGAAAAATCCCACCAAGTTTTGGTCTCCTCAAGAACCTCAAATCTCTGGTACTACAAGGAAATGGTTTAACAGGGGAAATACCACCAGACATAGGCAACCTTATCAAGCTGAAAAGGCTTGTTCTTTCAGAGAACTCAATCAGTGGGAAGATTCCAGATATTTTCAGTGGGTTAAGTGAGTTACTGATATTGGATTTAAGTAGAAATTCACTTTCTGGGCCTTTGCCTTTATCTCTTGGAAACTTAACTTCATTATTGAAGCTTGATGTAAGCAACAATAACTTGGAAGGAAATCTGCTAAAAGGGTTTGGTAATCTCAAGAATCTGACCCTAATGGACCTAAGAAACAACAGATTCCAAGGTGGATTGGTGTTGTCTATTCAAGAGATGATTTCCTTAGAAGAATTGGCCTTATCCAACAATCCAATAGGTGGAAGAATCAGTGTCTTAAAGTGGGAAAATCTTCAGAACTTGGTGATTTTGGAACTCTCTAACATGGAATTGACAGGGGAGATACCAGAGACCATAACAGACTTGAAGAGATTGAGGTTTTTGGGTCTTCGGAACAATTACCTTACAGGAAACGTTACACCAAAGCTAGAAACTCTTCCTTGTCTCAATGCTTTGTATCTAAGTGGAAACAATCTGACAGGTGACCTTAAATTCTCCGAAGAGTTTTATGGCAAAATGGGGAGCCGTTTTGGGGCCTGGGACAATCCTTACCTTTGTTACCCAGTTGGAGAAATATCAACAAGACAAGTCCCATTTGGAGTAAGACCATGCAACCAAGAGATCAAGTTTCTTGAAAATGATTCAAAAACATAA 1290 0.4031 MKSINGILVLFIICFLGATYCFGEELEVAPMENRELEALYSTIQGFVGNWWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTALNIGPIHENSLSCSQKKLEFRPHLFEFKHLESLTFVNCLLSRDNKHSVTIPTGWGELSGSLESLEFRSNPGLIGKIPPSFGLLKNLKSLVLQGNGLTGEIPPDIGNLIKLKRLVLSENSISGKIPDIFSGLSELLILDLSRNSLSGPLPLSLGNLTSLLKLDVSNNNLEGNLLKGFGNLKNLTLMDLRNNRFQGGLVLSIQEMISLEELALSNNPIGGRISVLKWENLQNLVILELSNMELTGEIPETITDLKRLRFLGLRNNYLTGNVTPKLETLPCLNALYLSGNNLTGDLKFSEEFYGKMGSRFGAWDNPYLCYPVGEISTRQVPFGVRPCNQEIKFLENDSKT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0683 429 FunFam Piriformospora indica-insensitive protein 2 34 206 - -
Lele54g0683 429 Gene3D Ribonuclease Inhibitor 306 399 IPR032675 -
Lele54g0683 429 SUPERFAMILY L domain-like 39 376 - -
Lele54g0683 429 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 29 374 - -
Lele54g0683 429 Pfam Leucine rich repeat 191 250 IPR001611 GO:0005515
Lele54g0683 429 Gene3D Ribonuclease Inhibitor 207 305 IPR032675 -
Lele54g0683 429 FunFam Piriformospora indica-insensitive protein 2 207 304 - -
Lele54g0683 429 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515
Lele54g0683 429 Gene3D Ribonuclease Inhibitor 34 206 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0683 Lele-ChrLele54 13754368 13756276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0683 142 417 Receptor kinase-like Gene Family AT4G08850 31.159 4.14e-25 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0683 54 13754368 13756276 Lele55g0815 55 5546087 5548163 hybridization
Lele54g0683 54 13754368 13756276 Lele56g0756 56 5735855 5737801 hybridization