Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0543 ATGGCCGGAGGAGGAGCAGCACCACCGCCGAAGCAGGACGAGCTTCTGCCACATCCAGTGAAAGAACAGCTACCCAATGTGTCTTACTGCATTACAAGTCCTCCTCCATGGCCGGAGGCGATTCTACTGGGTTTCCAGCATTACCTGGTCATGCTGGGCACAACTGTTCTGATACCCTCTTCTTTAGTTCCTCAAATGGGAGGAGGCAATGAAGAGAAAGCAAAAGTGATTCAGACTCTGCAGTTCGTGGCTGGCTTAAACACATTATTCCAGACTTTTTTTGGGACTCGTCTACCTGCGATTATTGGAGGATCCTACACCTTTGTCCCTGCTACCATTTCAATCATTTTAGCAGGTCGCTACGGTGACACTGTGGATCCTAACGAGAAATTTGTGAAGATAATGAGAGAAACACAGGGTGCTCTCATTGTGGCTTCAACCGTTCAAATTGTTCTTGGCTTCAGTGGTCTTTGGCGCAATATAGTGAGGTTCTTAAGTCCACTCTCTGCTGTTCCATTGGTTGCTCTATCAGGCTTTGGCTTGTATGAGTTGGGTTTTCCTGTGCTTGCAAAATGTGTGGAGATTGGGCTGCCAGAAATCGTCCTTCTTTTAATATTTTCACAGTACATTCCTCATATGATGAAAGGAGACAGGCCTATATTCGATCGCTTCGCAGTTATTTTCTCGGTTTCAATTGTGTGGGTTTATGCTCATCTCCTCACTGTGGGTGGAGCCTATAAAAATGCAGCACCTAAAACTCAAATGACTTGCAGAACTGATCGTGCTGGAATCATAAGTGGTTCCCCTTGGATTAGAGTCCCATATCCTTTTCAATGGGGTGCTCCTACATTTGATGCGGGAGAAACTTTTGCTATGATGGCTACTGCATTTGTTGCTTTAGTGGAGTCCACTGGTGCTTTTATTGCTGTGTCGAGATATGCAAGTGCAACTCCCATACCACCTTCAGTTCTTAGCCGCGGCGTTGGTTGGCAGGGAGTGGGAATTTTGTTATCGGGGATCTTTGGGACTGGGAATGGATCATCAGTTTCTGTTGAGAATGCTGGACTTTTGGCTCTGACTCGTGTTGGTAGCCGAAGGGTGGCTCAAATAGCGGCTGCATTCATGATCTTCTTCTCAATACTTGGAAAATTTGGAGCTGTCTTTGCTTCAATCCCAGCTCCAATTATTGCAGCATTGTACTGCCTTTTCTTTGCCTATGTTGGTTCTGCAGGCCTCGGTTTCCTTCAGTTCTGCAACCTAAACAGCTTCAGAACCAAGTTCATCTTAGGTTTTTCCTTCTACATGGGCCTTTCTGTTCCCCAGTACTTCAACGAGTACACCGCATTCAAAGGCTATGGTCCTGTCCACACCCATGCCAGATGGTTCAATGACATGATCAACATAGCATTCTCATCGGAACCATTTGTGGCTGGAATGCTGGCGCTGTTCTTGGACGCGACGCTGCGTAAGAAGGACAGCCAGACTCGTAAAGACAGAGGAATGCACTGGTGGGATAAATTCAGATCCTACAAGACTGATACAAGAAGTGAGGAATTCTACTCACTTCCGTTCAATCTGGACAAGTTTTTTCCATCGTTTTGA 1602 0.4619 MAGGGAAPPPKQDELLPHPVKEQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLVPQMGGGNEEKAKVIQTLQFVAGLNTLFQTFFGTRLPAIIGGSYTFVPATISIILAGRYGDTVDPNEKFVKIMRETQGALIVASTVQIVLGFSGLWRNIVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPEIVLLLIFSQYIPHMMKGDRPIFDRFAVIFSVSIVWVYAHLLTVGGAYKNAAPKTQMTCRTDRAGIISGSPWIRVPYPFQWGAPTFDAGETFAMMATAFVALVESTGAFIAVSRYASATPIPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVAQIAAAFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLGFLQFCNLNSFRTKFILGFSFYMGLSVPQYFNEYTAFKGYGPVHTHARWFNDMINIAFSSEPFVAGMLALFLDATLRKKDSQTRKDRGMHWWDKFRSYKTDTRSEEFYSLPFNLDKFFPSF 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0543 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 531 - -
Lele55g0543 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0543 Lele-ChrLele55 3504518 3507652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0543 7 532 Organic Solute Cotransporters AT1G60030 79.278 0.0 888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0543 55 3504518 3507652 Lele55g0543 55 3504518 3507652 ECH
Lele53g0932 53 18952853 18955974 Lele55g0543 55 3504518 3507652 hybridization
Lele54g0914 54 15634005 15637067 Lele55g0543 55 3504518 3507652 hybridization