Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0932 ATGGCCGGAGGAGGAGCCGCACCACCGCCGAAGCAGGACGAGCTTCTGCCACATCCAGTGAAAGAACAGCTACCCAATGTGTCTTACTGCATTACAAGTCCTCCTCCATGGCCGGAGGCTATTCTGCTGGGTTTCCAGCATTACCTGGTCATGCTGGGCACAACTGTTCTGATACCCTCTTCTTTAGTTCCTCAAATGGGAGGAGGCAATGAAGAGAAAGCAAAAGTGATTCAGACTCTGCAGTTCGTGGCTGGCTTAAACACATTATTCCAGACTTTTTTTGGGACTCGTCTACCTGCGATTATTGGAGGATCCTACACCTTTGTCCCTGCTACCATTTCAATCATTTTAGCAGGTCGCTACAGTTACACTGTGGATCCTAACGAGAAATTTGTGAAGATAATGAGAGAAACACAGGGTGCTTTCATTGTGGCTTCAACCGTTCAAATTGTTCTTGGCTTCAGTGGTCTTTGGCGCAATATAGTGAGGTTGATTGAACCTTCGTTCTTAAGTCCACTCTCTGCTGTTCCCTTGGTTGCTCTATCAGGCTTTGGCTTGTATGAGTTGGGTTTTCCTGTGTACATTCCTCATATGATGAAAGGAGACAGACCTATATTCGATCGCTTCGCAGTTATATTCTCGGTTTCAATTGTGTGGGTTTATGCTCATCTCCTCACTGTGGGTGGCGCCTATAAAAATGCAGCCCCTAAAACTCAAATGAGTTGCAGAACTGATCGTGCTGGAATCATAAGTGGTTCCCCTTGGATTAGAGTCCCATATCCTTTTCAATGGGGTGCTCCTACATTTGATGCGGGAGAAACTTTTGCTATGATGGCAACTGCATTTGTTGCTTTAGTGGAGTCCACTGGTGCTTTTATTGCTGGGTCGAGATATGCAAGTGCAACTCCCATACCACCTTCAGTTCTTAGCCGCGGCGTTGGTTGGCAGGGAGTGGGAATTTTGTTATCGGGGATCTTTGGGACTGGGAATGGATCATCAGTTTCTGTTGAGAATGCTGGACTTTTGGCTCTGACTCGTGTTGGTAGCCGAAGGGTGGCTCAAATAGCGGCTGCATTCATGATCTTCTTCTCAATACTTGGAAAATTTGGAGCTGTCTTTGCTTCAATCCCAGCTCCAATTATTGCAGCATTGTACTGCCTTTTCTTTGCCTATGTTGGTTCTGTAGGCCTCGGTTTCCTTCAGTTCTGCAACCTAAACAGCTTCAGAACCAAGTTTATCCTAGGTTTTTCCTTCTACATGGGCCTTTCTGTTCCCCAGTACTTCAACGAGTACACCGCATTAAAAGGCTATGGTCCTGTCCACACCCACGCCAGATGGTTCAATGACATGATCAACATACCATTCTCATCGGAACCATTTGTGGCTGGAATGCTTGCGCTGTTCTTGGACGCGACACTGCGGAAGAAGGACAGCCAGACTCGTAAAGACAGAGGAATGCACTGGTGGGATAAATTCAGATCCTACAAGACTGATACAAGAAGTGAGGAGTTCTACTCACTTCCGTTCAATATGAACAAGTTTTTTCCATCAGTATGA 1557 0.4624 MAGGGAAPPPKQDELLPHPVKEQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLVPQMGGGNEEKAKVIQTLQFVAGLNTLFQTFFGTRLPAIIGGSYTFVPATISIILAGRYSYTVDPNEKFVKIMRETQGAFIVASTVQIVLGFSGLWRNIVRLIEPSFLSPLSAVPLVALSGFGLYELGFPVYIPHMMKGDRPIFDRFAVIFSVSIVWVYAHLLTVGGAYKNAAPKTQMSCRTDRAGIISGSPWIRVPYPFQWGAPTFDAGETFAMMATAFVALVESTGAFIAGSRYASATPIPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVAQIAAAFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSVGLGFLQFCNLNSFRTKFILGFSFYMGLSVPQYFNEYTALKGYGPVHTHARWFNDMINIPFSSEPFVAGMLALFLDATLRKKDSQTRKDRGMHWWDKFRSYKTDTRSEEFYSLPFNMNKFFPSV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0932 518 Pfam Permease family 39 172 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lele53g0932 518 Pfam Permease family 186 428 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lele53g0932 518 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0932 Lele-ChrLele53 18952853 18955974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0932 7 518 Organic Solute Cotransporters AT1G60030 75.564 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0932 53 18952853 18955974 Lele53g0932 53 18952853 18955974 ECH
Lele53g0932 53 18952853 18955974 Lele55g0543 55 3504518 3507652 hybridization
Lele53g0932 53 18952853 18955974 Lele56g0528 56 3847788 3850876 hybridization