Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0232 ATGATTAAATACCAAATGTCGAATCAGGCAAGGCATTTGGCTGTAGTCTTTACCATCATGTTCTCCATGGTGGTGGCTCGGGTTCGATGCCGGCAGTGGGAGGCTATGGGGACGGGACAAGTGGTGGGACCCGAAGACTTGCTTTATGACCCAAGTGGCGGAGGTGTGATATATGCAGGGTGTAGCGATGGGTGGATCAAGAGAGTCACGGTGAACGAATCGGTGGCCGACACGGTGGTTCATAACTGGGTCAACACCGGAGGAAGACCTCTAGGTCTTGCTTCGGGTTCCAATGGTGATATCTTAGTCGCAGATGCATACAAGGGATTGGTGAGAGTGACAAGAGAAGGGAAGGTTGAGTTGTTGACAGATGAGGTTGAGGGAGTGAAGTTCAAGTTAACAGATGGAGTGGATATTGCAGAAGATGGCACCATTTATTTCACAGATGCTTCCTACAAATACAGTCTCAGTGAATTCATGTTTGACTTATTGGAAGGGAAACCTCATGGCAGACTCATAAGCTATGATCCTTCCACCAACCAAACAACACTTTTGGCTTCCAATCTCTACTTCGCCAATGGAGTTGCAGTCTCACCAGATCAACAATCTGTGCTCTTCTGTGAATCCCCTAGGAGAATGTGCAGAAAATATTATATAAAGGGCTCTAAGAAGGGAAGAACTGAAAATTTCGTTGAAGATCTACCCGGTTTGCCTGATAACATTCATTATGATGCACAAGCACAACATTATTGGATCGGCATGGCCACGGTAATTAATAATCTCAAACTCATTATGAAAAGACAACCAGTGATGGTAGAGATTGTGGAGACTAGTGGGGGACTTGTTTGTGTGGATTTGGAAGGAAAAGTAATAACTCGTTACATTGACATAGAGTTGTCCTCCGTTGCAAGTGGCATTAAGATCGCAAGTTTCATCTATTGTGGCTCATTGATCAATCCCTTCATCCTTCGTCTACATCTCTAG 984 0.4492 MIKYQMSNQARHLAVVFTIMFSMVVARVRCRQWEAMGTGQVVGPEDLLYDPSGGGVIYAGCSDGWIKRVTVNESVADTVVHNWVNTGGRPLGLASGSNGDILVADAYKGLVRVTREGKVELLTDEVEGVKFKLTDGVDIAEDGTIYFTDASYKYSLSEFMFDLLEGKPHGRLISYDPSTNQTTLLASNLYFANGVAVSPDQQSVLFCESPRRMCRKYYIKGSKKGRTENFVEDLPGLPDNIHYDAQAQHYWIGMATVINNLKLIMKRQPVMVEIVETSGGLVCVDLEGKVITRYIDIELSSVASGIKIASFIYCGSLINPFILRLHL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0232 327 Pfam Strictosidine synthase-like, N-terminal 34 69 - -
Lele55g0232 327 Pfam Strictosidine synthase 135 221 IPR018119 GO:0009058|GO:0016844
Lele55g0232 327 SUPERFAMILY Calcium-dependent phosphotriesterase 32 325 - -
Lele55g0232 327 Gene3D - 27 326 IPR011042 -
Lele55g0232 327 PANTHER STRICTOSIDINE SYNTHASE-RELATED 30 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0232 Lele-ChrLele55 1434136 1435449 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0232 55 1434136 1435449 Lele55g0232 55 1434136 1435449 ECH
Lele53g1254 53 21124649 21126191 Lele55g0232 55 1434136 1435449 hybridization