Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1254 ATGCTTCTATGCTTCAGATGCCTAATGCGGATCGTCATCACAGTTAAGACAACAACAAAACTATACGCAAGGCATTTGGCTGTGGTCTTTACCATCATGTTCTTCATGGGGGTGGCTCCGGTTCGATGCCGGCAATGGGAGGCTATGGGGACGGGACAAGTGGAGGGACCAGAAGACTTGCTTTATGACCCAAATGGCGGAGGTGTGATATATGCAGGGTGTAGCGATGGGTGGATCAAGAGAGTCACGGTGAACGAATCGGTGGCCGACACGGTGGTTCATAACTGGGTCAACACCGGAGGAAGACCTCTTGGTCTTGCTTCGGGCTCCGACGGTGATATCTTAGTCGCTGATGCATACAAGGGATTGGTGAGAGTGACAAGAGAAGGGAAGGTTGAGTTGTTGACAGACGAGGTTGAGGGAGTGAAGTTCAAGTTAACAGATGGAGTTGATATTGCAGAAGATGGCACCATTTATTTCACAGATGCTTCCTACAAATACGGTCTCACTGAATTCATGTTTGACTTATTGGAAGGGAAACCTCATGGCAGACTCATAAGCTATGATCCTTCCACCAACCAAACAACACTTTTGGCTTCCAATCTCTACTTCGCCAATGGAGTTGCAGTCTCACAAGATCAACAATCTGTGCTCTTCTGTGAATCCCCTAGGAGAATGTGCAGAAAATATTATATAAAGGGCTCTAAGAAGGGAAGAACTGAAAATTTCATCGAAGATCTACCCGGTTTGCCTGATAACATTCATTATGATGCACAATCCCAACATTATTGGATAGGCATGTCCACGCAGCCTTTGAATCTGACGCAGGATTTGGATACGGTGAAAAGACCACCAGTGATGGCAGAGATTGTGGAGACTAGTGGGGGACTTGTTTGTGTGGATTTGGAAGGAAAAGTAATAACTCGTTACAATGACACAGAGTTGTCTTCAGTTGCAAGTGGCATTAAGATCGCAAGTTTCATCTATTGTGGCTCCTTGATCAATCCCTTCATCCTTCGTCTACATCTCTAG 1032 0.4583 MLLCFRCLMRIVITVKTTTKLYARHLAVVFTIMFFMGVAPVRCRQWEAMGTGQVEGPEDLLYDPNGGGVIYAGCSDGWIKRVTVNESVADTVVHNWVNTGGRPLGLASGSDGDILVADAYKGLVRVTREGKVELLTDEVEGVKFKLTDGVDIAEDGTIYFTDASYKYGLTEFMFDLLEGKPHGRLISYDPSTNQTTLLASNLYFANGVAVSQDQQSVLFCESPRRMCRKYYIKGSKKGRTENFIEDLPGLPDNIHYDAQSQHYWIGMSTQPLNLTQDLDTVKRPPVMAEIVETSGGLVCVDLEGKVITRYNDTELSSVASGIKIASFIYCGSLINPFILRLHL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1254 343 Pfam Strictosidine synthase 148 234 IPR018119 GO:0009058|GO:0016844
Lele53g1254 343 Pfam Strictosidine synthase-like, N-terminal 47 82 - -
Lele53g1254 343 PANTHER STRICTOSIDINE SYNTHASE-RELATED 45 333 - -
Lele53g1254 343 SUPERFAMILY Calcium-dependent phosphotriesterase 46 341 - -
Lele53g1254 343 Gene3D - 43 342 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1254 Lele-ChrLele53 21124649 21126191 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1254 53 21124649 21126191 Lele53g1254 53 21124649 21126191 ECH
Lele53g1254 53 21124649 21126191 Lele55g0232 55 1434136 1435449 hybridization