Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0130 ATGGCGACCATGACGAGCTTGATCGGGTTAATCAATAAGATTCAACGGGCGTGTACAGTTTTAGGTGACCATGGCGGCGAGGGATTGTCCCTCTGGGAGGCTCTTCCCTCGGTGGCTGTGGTCGGAGGCCAGAGTTCAGGGAAATCTTCAGTGTTGGAAAGTGTGGTAGGAAGGGATTTTCTGCCTCGAGGATCTGGCATTGTCACAAGGAGGCCATTAGTGCTTCAGCTTCATAAGACTGAAGATGGGCAGCAAGAATATGCTGAGTTTCTCCATGCACCAAGAAAGAGATTCACTAACTTTGCCGCTGTGAGGAATGAAATATCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATATCAAATGTTCCAATTCATCTCAGCATATATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCCGGATTGACCAAGGTTGCAGTCGAGGGACAATCAGAAACTATAGTTGAAGATATTGAAAACATGGTCCGTTCCTATGTTGAGAAGTTTTATTGGGTTGTGAAGCCAAACTGCATCATACTGGCTATATCTCCAGCAAACCAAGATATTGCCACTTCAGATGCTATAAAACTGGCTAAAGAAGTTGATCCTCCAGGTGAAAGAACATTTGGAGTGTTGACAAAACTGGATCTTATGGATAAAGGAACCAATGCCGTTGATGTACTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTCAACCGTTCACAAGCTGATATCAATAAAAATGTCGACATGATTGTTGCTCGCAAGAAGGAACGTGAATATTTCGAGACAAGCCCTGAATATGGACATCTCGCTCATAAAATGGGCTCCGAATATCTTGCTAAGCTTTTATCTCAGCATTTGGAGATTGTTATCAGGCAGAAGATTCCCAGTATCATTGCCTTAATAAATAAGACCATTGATGAGCTTAATGCAGAGTTGGACCGTATTGGCAGGCCTATCGCCGTAGATTCCGGGGCCCAACTTTACACGATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAGAGAACACCTCGATGGAGGGCGTCCTGGTGGGGATCGGATAAATGGAGTTTTCGACCACCAATTGCCAGCTGCTTTGAAAAAGCTTCCATTTGATCGTCATCTAACCTTAAATAATGTACAGAGAGTTGTTACAGAAGCTGATGGATATCAGCCCCATCTTATTGCTCCGGAGCAAGGCTACAGAAGACTTATTGAAGGATCTATCAGCTATTTCAAAGGCCCCGCTGAAGCTTCTGTGGATGCTGTTCACTTCATTCTAAAGGAACTTGTACGGAAGTCGATTTCAGAAACTGAGGAATTGAAAAGATTTCCAACCCTTCAGTCTGATATAGCTGCTTCTGCCAACGAGTCATTGGAAAGATTTCGAGATGAAAGCAGGAAGACAGTTCTACGGCTGGTTGATATGGAGGCTAGCTATCTAACAGTGGAGTTCTTCCGGAAGATTAATGATGAACCAAATCGAACTGGTCCAAATGCCGAAAAGGAAAAGGAGAAGGAGAAGGAGAAGAGAAAGGACAAGTTCGTTGACAATTTCTCAGACAATCACCTTAGGAAGATAGCATCAAATGTTAGCTCATACATCCAAATGGTTCTTGATACACTAAAAAATTCGGTACCAAAGGCTGTGGTTTATTGTCAAGTCAGAGAGGCTAGGAGATCATTACTTAACCACTTTTATGTTCAGGTTGGGAAGAGAGAGAAGGAGCAATTGAGTGCCATGTTGGATGAAGATCCAGTGCTTATGGAAAAGAGACTTCAAATTGCTAAAAGGCTTGAATTGTACAAGCAAGCCAGGGATGATATTGATGCTGTGGCTTGGAAATGA 1887 0.4293 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQEYAEFLHAPRKRFTNFAAVRNEISDETDRITGKTKQISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQSETIVEDIENMVRSYVEKFYWVVKPNCIILAISPANQDIATSDAIKLAKEVDPPGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEIVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFREHLDGGRPGGDRINGVFDHQLPAALKKLPFDRHLTLNNVQRVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDAVHFILKELVRKSISETEELKRFPTLQSDIAASANESLERFRDESRKTVLRLVDMEASYLTVEFFRKINDEPNRTGPNAEKEKEKEKEKRKDKFVDNFSDNHLRKIASNVSSYIQMVLDTLKNSVPKAVVYCQVREARRSLLNHFYVQVGKREKEQLSAMLDEDPVLMEKRLQIAKRLELYKQARDDIDAVAWK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0130 628 PRINTS Dynamin signature 208 224 IPR022812 -
Lele55g0130 628 PRINTS Dynamin signature 231 250 IPR022812 -
Lele55g0130 628 PRINTS Dynamin signature 35 53 IPR022812 -
Lele55g0130 628 PRINTS Dynamin signature 189 207 IPR022812 -
Lele55g0130 628 PRINTS Dynamin signature 60 77 IPR022812 -
Lele55g0130 628 Pfam Dynamin GTPase effector domain 535 625 IPR003130 GO:0003924|GO:0005525
Lele55g0130 628 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lele55g0130 628 MobiDBLite consensus disorder prediction 505 525 - -
Lele55g0130 628 ProSiteProfiles GED domain profile. 537 628 IPR020850 -
Lele55g0130 628 FunFam Dynamin-related protein 1C 338 605 - -
Lele55g0130 628 Pfam Dynamin central region 228 495 IPR000375 -
Lele55g0130 628 Gene3D - 4 316 IPR027417 -
Lele55g0130 628 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 307 IPR030381 GO:0005525
Lele55g0130 628 SMART GED_2 532 625 IPR003130 GO:0003924|GO:0005525
Lele55g0130 628 CDD DLP_1 35 307 IPR001401 GO:0003924|GO:0005525
Lele55g0130 628 Pfam Dynamin family 38 219 IPR045063 -
Lele55g0130 628 SMART dynamin_3 4 258 IPR001401 GO:0003924|GO:0005525
Lele55g0130 628 Gene3D Dynamin, middle domain 340 605 - -
Lele55g0130 628 FunFam dynamin-related protein 1E 4 316 - -
Lele55g0130 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 315 IPR027417 -
Lele55g0130 628 PANTHER DYNAMIN 6 625 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0130 Lele-ChrLele55 836126 840867 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1348 53 21691815 21696426 Lele55g0130 55 836126 840867 hybridization