Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1348 ATGGCGACCATGACGAGCTTGATTGGGTTAATCAATAAGATTCAACGGGCGTGTACAGTTTTAGGTGACCATGGCGGCGAGGGATTGTCCCTCTGGGAGGCTCTTCCCTCGGTGGCTGTGGTCGGAGGCCAGAGTTCAGGGAAATCTTCAGTGTTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGGGGATCTGGCATTGTCACAAGGAGGCCACTAGTGCTTCAGCTTCATAAGACTGAAGATGGGCAGCAAGAATATGCTGAGTTTCTCCATGCACCAAGAAAGAGATTCACTAACTTTGCCGCTGTGAGGAAGGAAATATCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATATCAAATGTTCCAATTCATCTCAGCATATATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCCGGATTGACCAAGGTTGCAGTGGAGGGACAATCAGAAACTATAGTTGAAGATATTGAAAACATGGTCCGTTCCTATGTTGAGAAGTTTTATTGGGTTGTGAAGCCAAACTGCATCATATTGGCTATATCTCCAGCAAACCAAGATATTGCCACTTCAGATGCTATAAAACTTGCTAAAGAAGTTGATCCTCCAGGTGAAAGAACATTTGGAGTGTTGACAAAACTGGATCTTATGGATAAAGGAACCAATGCCGTTGATGTACTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTCAACCGTTCACAAGCTGATATCAATAAAAATGTCGACATGATTGTTGCTCGTAAGAAGGAACGTGAATATTTCGAGACAAGCCCTGAATATGGACATCTCGCTCATAAAATGGGCTCCGAATATCTTGCTAAGCTTTTATCTCAGCATTTGGAGATTGTTATCAGGCAGAAGATTCCCAGTATCATTGCCTTAATAAATAAGACCATTGATGAGCTTAATGCAGAGTTGGACAGTATTGGCAGGCCTATCGCTGTAGATTCCGGGGCCCAACTTTACACGATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAGAGAACATCTCGATGGAGGGCGTCCTGGTGGGGATCGGATAAATGGAGTTTTCGACCACCAATTGCCAGCTGCTTTGAAAAAGCTTCCATTTGATCGTCATCTAACCTTAAATAATGTACAGAGAGTTGTTACAGAAGCTGATGGATATCAGCCCCATCTTATTGCTCCGGAGCAAGGCTACAGAAGACTTATTGAAGGATCTATCAGCTATTTCAAAGGCCCCGCTGAAGCTTCTGTGGATGCTGTTCACTTCATTCTAAAGGAACTTGTACGGAAGTCGATTTCAGAAACTGAGGAATTGAAAAGATTTCCAACCCTTCAGTCTGATATAGCTGCTTCTGCCAACGAGTCATTGGAAAGATTTCGAGATGAAAGCAGGAAGACAGTTCTACGGCTGGTTGATATGGAGGCTAGCTATCTAACAGTGGAGTTCTTCCGGAAGATTAATGATGAACCAAATCGAACTGGTCCAAATGCCGAGAAGGAAAAGGAGAAGAGAAAGGACAAGTTCGTTGACAATTTCTCAGACAATCACCTTAGGAAGATAGCATCAAATGTTAGCTCATACATCCAAATGGTTCTTGATACACTAAAAAATTCGGTACCAAAGGCTGTGGTTTATTGTCAAGTCAGAGAGGCTAGGAGATCATTACTTAACCACTTTTATGTTCAAGTTGGGAAAAGAGAGAAGGAGCAATTGAGTGCCATGTTGGATGAAGATCCAGTGCTTATGGAAAAGAGACTTCAAATTGCGAAAAGGCTTGAATTGTACAAGCAAGCCAGGGATGATATTGATGCTGTGGCTTGGAAATGA 1875 0.4272 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQEYAEFLHAPRKRFTNFAAVRKEISDETDRITGKTKQISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQSETIVEDIENMVRSYVEKFYWVVKPNCIILAISPANQDIATSDAIKLAKEVDPPGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEIVIRQKIPSIIALINKTIDELNAELDSIGRPIAVDSGAQLYTILEMCRAFDKVFREHLDGGRPGGDRINGVFDHQLPAALKKLPFDRHLTLNNVQRVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDAVHFILKELVRKSISETEELKRFPTLQSDIAASANESLERFRDESRKTVLRLVDMEASYLTVEFFRKINDEPNRTGPNAEKEKEKRKDKFVDNFSDNHLRKIASNVSSYIQMVLDTLKNSVPKAVVYCQVREARRSLLNHFYVQVGKREKEQLSAMLDEDPVLMEKRLQIAKRLELYKQARDDIDAVAWK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1348 624 FunFam dynamin-related protein 1E 4 316 - -
Lele53g1348 624 PANTHER DYNAMIN 6 621 IPR022812 -
Lele53g1348 624 Pfam Dynamin GTPase effector domain 531 621 IPR003130 GO:0003924|GO:0005525
Lele53g1348 624 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lele53g1348 624 Gene3D - 4 316 IPR027417 -
Lele53g1348 624 Gene3D Dynamin, middle domain 340 601 - -
Lele53g1348 624 ProSiteProfiles GED domain profile. 533 624 IPR020850 -
Lele53g1348 624 SMART dynamin_3 4 258 IPR001401 GO:0003924|GO:0005525
Lele53g1348 624 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 307 IPR030381 GO:0005525
Lele53g1348 624 FunFam Dynamin-related protein 1C 338 601 - -
Lele53g1348 624 Pfam Dynamin family 38 219 IPR045063 -
Lele53g1348 624 Pfam Dynamin central region 228 495 IPR000375 -
Lele53g1348 624 PRINTS Dynamin signature 35 53 IPR022812 -
Lele53g1348 624 PRINTS Dynamin signature 60 77 IPR022812 -
Lele53g1348 624 PRINTS Dynamin signature 208 224 IPR022812 -
Lele53g1348 624 PRINTS Dynamin signature 231 250 IPR022812 -
Lele53g1348 624 PRINTS Dynamin signature 189 207 IPR022812 -
Lele53g1348 624 CDD DLP_1 35 307 IPR001401 GO:0003924|GO:0005525
Lele53g1348 624 SMART GED_2 528 621 IPR003130 GO:0003924|GO:0005525
Lele53g1348 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1348 Lele-ChrLele53 21691815 21696426 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1348 53 21691815 21696426 Lele55g0130 55 836126 840867 hybridization