Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0975 ATGGATTTTAGCTTCTGTTTCAGCTCTCCAATCATTTCATTTCTTGTACATTTCCTCTTCCTGGTTGTTTCTCTGGCTTGTTCTGTTCATTCATCTCAGTCTCAGATTTTTAATCAGACTTTTCATCCCCAGAAACAGCTTCTGAAACTAAACATCATAAGAACTCGTCTCCAGCAGATTAACAAGCCTTCTGTCAAAACAATTCAGAGTCCTGATGGAGATATAATAGACTGTGTTGTGTCTCATCAGCAACCAGCTTTTGATCATCCTCTTCTGAAAGGACAGAAACCATTGGATCCTCCAGAGAGGCCTAAAACCCATCATCAAAACCAAATGGGTTGGTTCAGTGAGAATTTTCAGACATGGACTTTGTCTGGAGAATCATGTCCTGAAGGAACCGTCCCAATCAGAAGAACAAGAGAAGAAGACATGTTAAGAGCAAGTTCTGTTCGCGGATTTGGAAGAAAAATCAGAGGCCTTGCAAGGAGAGACTCAAATAGTAATGGCCATGAGCATGCAGTAGGATTTGTGAGTGGCGATAAGTATTATGGAGCAAAAGCAAGCATAAACGTGTGGACACCTCGTGTGGCAAACCAATATGAATTCAGTTTATCTCAAATTTGGGTAATTTCTGGTTCATTTGGCCAAGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGTGACAGTTATCCCAGGTTCTTTACTTATTGGACAAGTGATGCTTATCAAGCAACTGGGTGCTACAATTTATTGTGCTCTGGCTTTGTTCAAACTAATAATAAGATTGCAATTGGGGCTGCAATTTCTCCTACTTCTTCTTACAAGGGTGGTCAATTTGATATTAGCCTGCTTATTTGGAAGGATCCGAAGCACGGGAATTGGTGGCTGGAGTTCGGGTCGGGTATATTAGTTGGGTACTGGCCGTCGATGCTGTTCACACACCTAAGACAACACGCGAGCATGGTTCAATTTGGAGGAGAAATAGTGAACTCAAGGTCGTCGGGTTCACACACACTGACCCAAATGGGAAGTGGTCATTTTGCAGAAGAAGGATTTGGAAAAGCTTCTTACTTTCGGAACTTAGAAGCCGTTGATTGGGACAATAACTTGATCCCTTTGTCCAATCTTCGGGTCCTCGCCGATCACCCGAATTGCTATGACATTCAAGGCGGTATTAATCGTGTGTGGGGCAACTATTTTTACTACGGCGGACCCGGTAGAAATGTCAGGTGCCCCTAA 1257 0.4328 MDFSFCFSSPIISFLVHFLFLVVSLACSVHSSQSQIFNQTFHPQKQLLKLNIIRTRLQQINKPSVKTIQSPDGDIIDCVVSHQQPAFDHPLLKGQKPLDPPERPKTHHQNQMGWFSENFQTWTLSGESCPEGTVPIRRTREEDMLRASSVRGFGRKIRGLARRDSNSNGHEHAVGFVSGDKYYGAKASINVWTPRVANQYEFSLSQIWVISGSFGQDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYKGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSMLFTHLRQHASMVQFGGEIVNSRSSGSHTLTQMGSGHFAEEGFGKASYFRNLEAVDWDNNLIPLSNLRVLADHPNCYDIQGGINRVWGNYFYYGGPGRNVRCP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0975 418 Pfam Neprosin activation peptide 67 174 IPR025521 -
Lele54g0975 418 Pfam Neprosin 200 411 IPR004314 -
Lele54g0975 418 Gene3D - 190 306 - -
Lele54g0975 418 MobiDBLite consensus disorder prediction 89 109 - -
Lele54g0975 418 FunFam Putative carboxyl-terminal proteinase 191 310 - -
Lele54g0975 418 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 53 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0975 Lele-ChrLele54 16050276 16053470 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1008 49 6403446 6407894 Lele54g0975 54 16050276 16053470 CCT
Lele54g0975 54 16050276 16053470 Lele55g0481 55 3038927 3042233 hybridization
Lele54g0975 54 16050276 16053470 Lele56g0467 56 3440661 3444388 hybridization