Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0056 ATGCCGGTACGAAGAGAACTCATCCGTGACAAAGTTTTCAGGCGTGTCAAAGATGGATGCACTTCAGTTAGGTCCTTTGTAATTAAGTTGCAAGTTTTCCTCTCAGCTTCTCAGTTCTGGAATTCTTTGCATGATCTATCTAACTCAGAGACAACACTTGAGTTTCGAAATGTTAATCGTTTAGATTTCACTGACGGTGTGAACGAAATTGGCAGAGTAGTTTCTCTTTCTGAGAAAGTCAACGGCTGTGATCAGCGTCTGAAACTCCCTTTTGTTCTTAGCTGGTGATCCAACATGTTCCGCCTTAGAAAGCAAACCCAGAATCAAGTGGACAATGATCCCTCTTACAAACAAGCAAAGGTGGCTGAACTGAGGGCAGCTCTGGGGCCATTATCTGGGCGAAGTCTAAAGTATTGCACAGACGCATGTCTCAGGAGATATTTAGAAGCCAGGAACTGGAACCTTGATAAAGCCAAGAAAATGTTGGAAGAAACCCTCAAATGGAGATCCACTTACAAGCCCGAGGAAATCCGTTGGCCTGAAGTTGCACACGAGGGTGAAACTGGAAAAGTGTCAAGGGCAAATTTTCACGATCGTTCTGGAAGAACTGTGCTTATCATGAGGCCTGGAATGCAGAACACGGCATGTCCAGAAGATAATATCAGGCATTTGGTGTACCTCATGGAGAATGCTATCCTCAATCTCCCCGAAGGTCAAGAACAGATGTCATGGCTCATAGATTTCACTGGATTTTCACTCAACACTAATGTTTCTGTCAAAACAGCTCGTGAAATCATCCACATCTTACAGAATCACTATCCTGAAAGGCTTGGTATTGCTTTTCTCTATAGCCCACCAAGGATATTTCAAGCTTTTTGGAAGGCTGTGAGATACTTCTTGGATCCCAAGACATTCCAGAAGGTGAAATTTGTTTATCCTAAGGACAAGGAGAGTGAGGAACTGATGAAATCGCTGTTTGACGTGGAAAATCTTCCGAATGAGTTTGGAGGAAAAGCGACATTGAAGTATGATCATGAAGAGTTTTCAAAGATGATGATAGAAGATGATGTAAAAACTGCGAAATTCTGGGGAGTTGATGACAAACCATTCAGCAGTAAGAATGAACATCCTAGTACAGAGGTAGTAGTGCCAGAACCAGTGACGATCTGA 1170 0.4282 MPVRRELIRDKVFRRVKDGCTSVRSFVIKLQVFLSASQFWNSLHDLSNSETTLEFRNVNRLDFTDGVNEIGRVVSLSEKVNGCDQRLKLPFVLSWXSNMFRLRKQTQNQVDNDPSYKQAKVAELRAALGPLSGRSLKYCTDACLRRYLEARNWNLDKAKKMLEETLKWRSTYKPEEIRWPEVAHEGETGKVSRANFHDRSGRTVLIMRPGMQNTACPEDNIRHLVYLMENAILNLPEGQEQMSWLIDFTGFSLNTNVSVKTAREIIHILQNHYPERLGIAFLYSPPRIFQAFWKAVRYFLDPKTFQKVKFVYPKDKESEELMKSLFDVENLPNEFGGKATLKYDHEEFSKMMIEDDVKTAKFWGVDDKPFSSKNEHPSTEVVVPEPVTI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0056 389 CDD SEC14 197 338 IPR001251 -
Lele54g0056 389 SUPERFAMILY CRAL/TRIO N-terminal domain 104 180 IPR036273 -
Lele54g0056 389 Pfam CRAL/TRIO domain 195 337 IPR001251 -
Lele54g0056 389 PANTHER GH16843P 105 369 - -
Lele54g0056 389 SMART sec14_4 185 340 IPR001251 -
Lele54g0056 389 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 179 343 IPR001251 -
Lele54g0056 389 Pfam CRAL/TRIO, N-terminal domain 139 164 IPR011074 -
Lele54g0056 389 Gene3D - 95 372 IPR036865 -
Lele54g0056 389 SMART CRAL_TRIO_N_2 140 165 IPR011074 -
Lele54g0056 389 SUPERFAMILY CRAL/TRIO domain 179 358 IPR036865 -
Lele54g0056 389 FunFam Phosphatidylinositol transfer protein 3 100 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0056 Lele-ChrLele54 467891 474170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0056 144 333 Acyl Lipid Metabolism Gene Families AT1G55840 25.714 2.49e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0056 54 467891 474170 Lele54g0056 54 467891 474170 ECH
Lele53g0055 53 427178 429387 Lele54g0056 54 467891 474170 ECH