Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele53g0055 | ATGTTCCTCCGCCTTAGAAAGCAAACCCAGAATCAAGTGGAGAATGATCCCTCCTACAAAGATGCAAAGGTGGCTGAATTGAGGGCAGCTCTGGGGCCATTATCTGGGCGAAGTCTAAAGTATTGCACAGACGCATGTCTCAGGAGATATTTAGAAGCCAGGAATTGGAACCTTGATAAAGCCGAGAAAATGTTGGAAGAAACACTCAAATGGAGATCCGCTTACAAGCCTGAGGAAATCCGTTGGCCTGAAGTTGCACATGAGGGTGAAACTGGAAAAGTGTCAAGAGCAAATTTTCACGATCGTTCTGGAAGAACTAACACGGCATGCCCAGCAGATAATATCAGGCATTTAGTGTACCTCATGGAGAATGCTATCCTCAATCTCCTCGAAGGTCAAGAACAGATGTCATGGCTGATAGACTTCACTGGATTTTCACTCAACACTAATGTTTCTGTCAAAACAGCTCGTGATATAATTTACATTTTACAGAATCACTATCCTGAAAGGCTCGGTATTGCTTTTCTCTATAGCCCACCAAGGATATTTCAAGCTTTTTGGAAGGCTGTGAGATACTTCTTGGATCCCAAGACATTCCAGAAGGTGAAATTTGTTTATCCCGAGGACAAGGAGAGTGAAGAGCTGATGATATCACTGTTTAACGTGGAAAATCTACCCAATGAGTTTGGAGGAAAAGCGACATTGAAGTATGATCATGAAGAGTTTTCAAGGATGATGATAGAAGATGATGTAAAAACTGCTAAATTGTGGGGTGTTGATGACAAACCATTTGGCACTGAGAATGAACATCCTAGTACTGAGGTGGTCGTGCCAGGACCAGTGACTGTTTGA | 852 | 0.4272 | MFLRLRKQTQNQVENDPSYKDAKVAELRAALGPLSGRSLKYCTDACLRRYLEARNWNLDKAEKMLEETLKWRSAYKPEEIRWPEVAHEGETGKVSRANFHDRSGRTNTACPADNIRHLVYLMENAILNLLEGQEQMSWLIDFTGFSLNTNVSVKTARDIIYILQNHYPERLGIAFLYSPPRIFQAFWKAVRYFLDPKTFQKVKFVYPEDKESEELMISLFNVENLPNEFGGKATLKYDHEEFSRMMIEDDVKTAKLWGVDDKPFGTENEHPSTEVVVPGPVTV | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele53g0055 | 283 | Gene3D | - | 3 | 269 | IPR036865 | - | |
| Lele53g0055 | 283 | CDD | SEC14 | 94 | 232 | IPR001251 | - | |
| Lele53g0055 | 283 | Pfam | CRAL/TRIO domain | 111 | 231 | IPR001251 | - | |
| Lele53g0055 | 283 | SUPERFAMILY | CRAL/TRIO domain | 82 | 252 | IPR036865 | - | |
| Lele53g0055 | 283 | SMART | CRAL_TRIO_N_2 | 43 | 68 | IPR011074 | - | |
| Lele53g0055 | 283 | PANTHER | GH16843P | 9 | 265 | - | - | |
| Lele53g0055 | 283 | SMART | sec14_4 | 88 | 234 | IPR001251 | - | |
| Lele53g0055 | 283 | Pfam | CRAL/TRIO, N-terminal domain | 42 | 67 | IPR011074 | - | |
| Lele53g0055 | 283 | FunFam | Phosphatidylinositol transfer protein 3 | 3 | 265 | - | - | |
| Lele53g0055 | 283 | ProSiteProfiles | CRAL-TRIO lipid binding domain profile. | 89 | 237 | IPR001251 | - | |
| Lele53g0055 | 283 | SUPERFAMILY | CRAL/TRIO N-terminal domain | 7 | 83 | IPR036273 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele53g0055 | Lele-ChrLele53 | 427178 | 429387 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele53g0055 | 53 | 427178 | 429387 | Lele53g0055 | 53 | 427178 | 429387 | ECH | |
| Lele53g0055 | 53 | 427178 | 429387 | Lele54g0056 | 54 | 467891 | 474170 | ECH |