Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1312 ATGTTTTGCTCAACGAACTTTTCCTCCATAACCAAAACTGTTGCTCAAGCTTACCTTCCCGAAAGCGATTCATCTTCTCAGCCCGTACGAAGCAATGATCCCAAGCCTCCACTTATCTCCGCAAAACCAAAAGCCATCACTTTACCCAGAAAGAAGCGCAACCGTTCTCCCCCTCGGTCCACTGTAGTCCAAATCGAACGCATTGTTGGCGCCGGCAGCTTCCGTGACGGCCAACCAGCTGATCCGGACGTGAGGAAGTCGGTATTTGACTTGTTCTTGGGCAAGAAATTTGAGGGACCGGTGGAGAAGAGGCTGCGGGAGACTGGAGAGTGGCTAATTAACAATACCGAGCAAGATTTTCGTTCTTCTGGAAAAAGGATTCTGTTTTTTGTGTTGCAGTGGATACTGCCTATTTGGGCTGTGTCACTCCTAATAGCTTCCGGGGCGATCGAGTTACCATTCAACTCTCCTTTTCTTGATGACTTGATCATGTGTACATCGAAGCAGGGGCCGCCAAAAACCCCAGATTCTTCTCTTCTCTCTCCTCCCCTGAATTGCTACAATATCCATCTCATACACAGAAATTCAAGGGCTGAGTACCACTTGTGCCGTGACTCAGACGGGGTAGAGGCTAGAGATAGAGTGGGAGAGATCAGCGCTCCGAATTTAGATATGGGTACGCTTCAGACTTGGCGAAAAGCTTATGGTGCCCTCAAAGATACCACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGAGGTTGCCATAGTTAAAGCCACGAACCACGTTGAATGCCCTCCAAAGGAGAGACACCTTAGAAAAATTCTATTTGCCACGTCTGCTATTCGACCCCGAGCAGATGTTGCTTACTGCATTCATGCACTTGCCCGTCGATTGGCCAAGACACGAAATTGGACGGTGGCACTAAAAACACTGATTGTCATCCATAGGCTATTAAGAGAGGGTGATCCTACTTTCAAAGAAGAATTTCTGAATTTCTCACAAAGAGGGCGCATTCTCCAACTTTCTAATTTTAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCTTGGGTACGCACATATGCATTGTTTTTGGAAGAGAGGCTTGAATGTTTTCGGATTTTGAAGTATGATATTGAAGCTGAACGTCTTCCCAAGCCTGCCCAAGGGCAGGAGAAGGGTTACAGCAGGACGAGGGATCTGGAAAGTGAAGAACTATTGGAGCAGTTGCCCGTTTTGCAGCAGCTTCTCTATCGGCTTATTGGCTGCAAGCCAGAAGGAGCAGCTGTTAGCAACTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCCGTTAATGATGGAATCATCAATCTTGTTGATAAGTTTTTTGAGATGCCAAGACATGAAGCTGTCAAAGCCTTTGATATCTATAGACGTGCTGGCCAGCAGGCAGCAAATTTATCTGATTTCTATGAAGTATGCAAAGGTTTGGAACTTGCTCGGAATTTTCAGTTTCCTGTCCTAAGAGAGCCTCCTCAATCTTTTCTTACAACCATGGATGAGTACATAAGAGAGGCACCGCGAGTGGTGACAGTGCCAACTGAGCCATTGCTTCAGTTGACATACAGACCAGAGGAAGAAGTTCCTGCAATTGAAGACAGTAAAGCATCCGTTGAAGAGGAGGAGCCATCAGTGCCTGCAGATGATGTTGCCTCCAATTCTAAGACTGTTCCTCCTCCTCCTCCGCTTCCATCTCAAAACAATTTTGACACTGGAGACTTATTGGGTTTGAGTGACACTGTACCTGATGCATCGTCGATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTACCCACTGAAAATGGCACAACATCTGGTTTTGAATCTAGTGCCACTCAAGCAAAAGATTTTGATCCAACTGGATGGGAGCTAGCTTTGGTTTCCACTCCGAGTAGCAATATTTCCTCAGTCAATGACAGACAATTGGCTGGCGGAATGGACTCTCTCACTCTTAACAGCTTATACGATGAAGCTGCATATAGATCACAGCAGCCAGTGTATGGAGCACCGGCTCCAAATCCATTTGAGGTTCAAGATCCATTCGCTTTCTCTAGTGGCATCTCTCCTCCTCCTGCTGTCCAAATGGAAGCGATGTCTCAGCAGCAAACGAATCCATTTGGTCCATTCCAACCTTTTCAGCCTCAGCCGCAGCAGCAGCTGTTGATGAGCGCTGCAAATCCTTTTGGGGAGGCAGGATATGGAGCGTTTCCAGCTAATCCTGTTTCTCAGCCACAAAATAACAACAATCCATTTGGTAACCCAGGCTTGCTATGA 2361 0.4651 MFCSTNFSSITKTVAQAYLPESDSSSQPVRSNDPKPPLISAKPKAITLPRKKRNRSPPRSTVVQIERIVGAGSFRDGQPADPDVRKSVFDLFLGKKFEGPVEKRLRETGEWLINNTEQDFRSSGKRILFFVLQWILPIWAVSLLIASGAIELPFNSPFLDDLIMCTSKQGPPKTPDSSLLSPPLNCYNIHLIHRNSRAEYHLCRDSDGVEARDRVGEISAPNLDMGTLQTWRKAYGALKDTTKVGLAHVNSDYADLEVAIVKATNHVECPPKERHLRKILFATSAIRPRADVAYCIHALARRLAKTRNWTVALKTLIVIHRLLREGDPTFKEEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKGYSRTRDLESEELLEQLPVLQQLLYRLIGCKPEGAAVSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAVKAFDIYRRAGQQAANLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMDEYIREAPRVVTVPTEPLLQLTYRPEEEVPAIEDSKASVEEEEPSVPADDVASNSKTVPPPPPLPSQNNFDTGDLLGLSDTVPDASSIEERNALALAIVPTENGTTSGFESSATQAKDFDPTGWELALVSTPSSNISSVNDRQLAGGMDSLTLNSLYDEAAYRSQQPVYGAPAPNPFEVQDPFAFSSGISPPPAVQMEAMSQQQTNPFGPFQPFQPQPQQQLLMSAANPFGEAGYGAFPANPVSQPQNNNNPFGNPGLL 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1312 786 MobiDBLite consensus disorder prediction 551 609 - -
Lele53g1312 786 MobiDBLite consensus disorder prediction 554 570 - -
Lele53g1312 786 SUPERFAMILY GAT-like domain 402 533 - -
Lele53g1312 786 FunFam Clathrin assembly protein AP180 230 385 - -
Lele53g1312 786 SUPERFAMILY ENTH/VHS domain 255 386 IPR008942 -
Lele53g1312 786 MobiDBLite consensus disorder prediction 768 786 - -
Lele53g1312 786 CDD ANTH_N 256 378 - -
Lele53g1312 786 PANTHER CLATHRIN ASSEMBLY PROTEIN 230 730 IPR045192 GO:0048268|GO:0072583
Lele53g1312 786 ProSiteProfiles ENTH domain profile. 248 385 IPR013809 -
Lele53g1312 786 Gene3D - 231 385 IPR008942 -
Lele53g1312 786 Gene3D ANTH domain 397 548 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele53g1312 786 SMART enth_2 254 385 IPR013809 -
Lele53g1312 786 FunFam Putative clathrin assembly protein 397 545 - -
Lele53g1312 786 Pfam ANTH domain 255 533 IPR011417 GO:0005543
Lele53g1312 786 MobiDBLite consensus disorder prediction 19 33 - -
Lele53g1312 786 MobiDBLite consensus disorder prediction 761 786 - -
Lele53g1312 786 MobiDBLite consensus disorder prediction 19 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1312 Lele-ChrLele53 21478888 21486355 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1312 53 21478888 21486355 Lele55g0167 55 1054533 1058890 hybridization