Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0907 ATGGCTCTCTCTCGCTTTGGTTCTTCTTCTTCGTCTAGATCCAGTCTTCTCAGACCTATCTCATCTGCATTCTCCTCCGCCCCTTCTTTCCGCCGTTCGATCTCCTCTGCCGCCGATGACTCCTCGACTCTCACCATTGAAACCTCTCTTCCATTCACCGCCCACAATTGCGACACTCCTTCGCGATCCGTTGACACAACTCCCAAGGAACTCACGTCCTTCTTCCGCGACATGGCCGTCATGCGACGGATGGAGATAGCCGCTGATTCCCTCTATAAGTCTAAGCTCATCCGAGGGTTCTGTCACTTGTACGATGGCCAGGAAGCTGTGGCCGTCGGCATGGAGGCTGCCATTACCAAGAAGGATTGCATAATAACATCTTATCGTGATCATTGTACCTTCCTGGGTCGCGGTGGAACCCTGTTGGAGATATTTTCGGAGCTCATGGGTCGTCCAGATGGGTGCGCGAAAGGAAAGGGTGGCTCTATGCACTTCTATAAGAAGGAAGCTGGGTTCTATGGCGGTCACGGGATTGTTGGGGCTCAGGTACCTCTGGGGTGTGGATTAGCTTTTGCTCAGAAGTACTCTAAGGATGAAAATGTCACCTTCGCTTTGTACGGTGATGGTGCGGCAAATCAGGGGCAGTTGTTTGAGGCGCTAAACATAGCCGCGCTTTGGGATCTCCCTGCCATTTTGGTCTGCGAGAATAATCACTACGGGATGGGGACGGCAGAATGGAGAGCTGCTAAGAATCCTGCTTATTACAAGCGTGGGGACTATGTTGCTGGGTTGAAGGTAGACGGCATGGATGTTCTTGCTGTAAAGCAGGCATGCAAATTTGCAAAGGAGTATGCTTTGAAGAATGGGCCCATTGTTCTTGAATTGGACACCTACAGGTACCATGGCCATTCCATGTCTGATCCTGGTAGCACATATCGTACACGTGATGAGGTTTCTGGCGTGAGACAGGAGCGTGATCCAATTGAGAGAGTGAGAAAGCTGTTATTGAAACATGAGATTGCTGCTGAAAAGGAACTAAAGGACATTGAAAAGGAAGTCAAAAAAGAAGTTGATGAAGCTATAGCTAAAGCAAAGGAGAGTCCATTGCCGGAGCCATCTGAATTATTTACCAATGTATATGTTAATGGTTTAGGGACTGAGGCATGTGGGGTTGACAGGAAGGAAGTAAGAGTTACATTACCATGA 1206 0.49 MALSRFGSSSSSRSSLLRPISSAFSSAPSFRRSISSAADDSSTLTIETSLPFTAHNCDTPSRSVDTTPKELTSFFRDMAVMRRMEIAADSLYKSKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITSYRDHCTFLGRGGTLLEIFSELMGRPDGCAKGKGGSMHFYKKEAGFYGGHGIVGAQVPLGCGLAFAQKYSKDENVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYKRGDYVAGLKVDGMDVLAVKQACKFAKEYALKNGPIVLELDTYRYHGHSMSDPGSTYRTRDEVSGVRQERDPIERVRKLLLKHEIAAEKELKDIEKEVKKEVDEAIAKAKESPLPEPSELFTNVYVNGLGTEACGVDRKEVRVTLP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0907 401 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 35 383 - -
Lele53g0907 401 CDD TPP_E1_PDC_ADC_BCADC 74 364 - -
Lele53g0907 401 Coils Coil 339 363 - -
Lele53g0907 401 FunFam Pyruvate dehydrogenase E1 component subunit alpha 33 394 - -
Lele53g0907 401 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 62 382 IPR029061 -
Lele53g0907 401 Pfam Dehydrogenase E1 component 77 372 IPR001017 GO:0016624
Lele53g0907 401 Gene3D - 28 395 - -
Lele53g0907 401 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 69 381 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0907 Lele-ChrLele53 18736555 18740956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0907 1 401 Acyl Lipid Metabolism Gene Families AT1G24180 77.307 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0907 53 18736555 18740956 Lele55g0568 55 3691456 3695820 hybridization
Lele53g0907 53 18736555 18740956 Lele56g0547 56 4024776 4028933 hybridization