Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1545 ATGTCTCGGATGTATGTATGTCTCGTTCTGGTTCTGAACCTGCTTTCAACTGTGACTTCGACATCTTCCTCATTGGGATCAGCTCGTTCGATCCTTCGGGACGTGAACGATAATAGTAAAAATGGTGATCCTCGAGATTATGCCGTTGATTTGAATGCAACGAGCTTCATTACAGTTCTGAAGGATACGCCGGCTGCTTTTGCCATTGTCGAATTCTTCGCCCATTGGTGCCCTGCTTGCAGAAATTATAAGCCGCACTATGAAAAAGTTGCAAGGCTCTTTAATGGACCTGATGCAGTGCATCCAGGAATTGTATTGATGGCAAGGGTAGACTGTGCTTTGAAGATGAATACTAAACTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTCTTTGGGGTCCTCCTTCTAAATTTGTTGCTGGTGGTTGGGAACCAAAAAAAGACAAAGTTGATATATGGATGATTGATGATGGGCGCACAGCTGATAACCTGCTTAATTGGATCAACAAGCAAATGGGCAGTTCATTTGGCTTGGATGATCAGAAATTTGAAAATGAGAAACTTTCATCCAATGTGTCAGACCCTGAACAGATTGCAAGAGCTGTCTATGATGTTGAAGAGGCAACTGCCATAGCTTTTGACATCATCTCAGAGCACAAGATGATAAAGCCTGAAACCCGTGCTTCACTCATAAAATTTCTTCAGCTTTTGGTGGCGCATCATCCTTCTAGGAGATGTCGGAAGGGTGCTGCTGAATTACTTGTGAGCTTTGATGACTTTTACCCAGCAGATTTGCAGTCAGCTAATAGTCAGGAAGATGACAGCGGAAATGTTGTGGCAAGGAACTTTCAGATTTGTGGAAAAGATGTACCTCGTGGATACTGGATGTTCTGCCGTGGCAGCAAGAATGATACCAGGGGCTTTAGCTGCGGTTTATGGGTTCTCCTGCATTCGCTTTCAGTGAGAATCGAGGATGGAGAAAGTCAGTACACGTTTAATGCTACATGTGATTTTGTTCACAATTTTTTTGTCTGTGAGGAATGTCAACAGCATTTTTACAAGATGTGCTTAAGTGTGTCTAGTCCAATCAACAAAGCTCGTGACTTTGCTCTCTGGTTGTGGAGTGCCCATAATATGGTTAATGAAAGGTTGATGAAAGAAGAAGCATCTCTAGGAACAGGTGATCCCAAATTTCCAAAGATGATATGGCCTCCAAATAAGCTTTGTCCTACGTGTCACCAAGACCTTGGCCGGAGGACCCACAAAATTGAATGGAACAAGGATGAGGTCTACAAGTTTTTGACTCGATACTATGGAGAAAAGCTCGCATCTCTATATAAGACCAAGGGCATAGCCGGAAATGATGGAACCGAAGGAGCTGTCGAAGATTCAATAGCATCAAGTAATTCAGTGCCCGTTGGTGCGGCATTGGCAATTGCTCTTGCTAGCTGTGGTTTTGGAGCACTTGCTTGCTACTGGCGTTCCCAACAAAAGAGCCGGAAGTATTTTCACCAACTACACTCTTTAAAGAATATATGA 1545 0.4317 MSRMYVCLVLVLNLLSTVTSTSSSLGSARSILRDVNDNSKNGDPRDYAVDLNATSFITVLKDTPAAFAIVEFFAHWCPACRNYKPHYEKVARLFNGPDAVHPGIVLMARVDCALKMNTKLCDKFSVGHYPMLLWGPPSKFVAGGWEPKKDKVDIWMIDDGRTADNLLNWINKQMGSSFGLDDQKFENEKLSSNVSDPEQIARAVYDVEEATAIAFDIISEHKMIKPETRASLIKFLQLLVAHHPSRRCRKGAAELLVSFDDFYPADLQSANSQEDDSGNVVARNFQICGKDVPRGYWMFCRGSKNDTRGFSCGLWVLLHSLSVRIEDGESQYTFNATCDFVHNFFVCEECQQHFYKMCLSVSSPINKARDFALWLWSAHNMVNERLMKEEASLGTGDPKFPKMIWPPNKLCPTCHQDLGRRTHKIEWNKDEVYKFLTRYYGEKLASLYKTKGIAGNDGTEGAVEDSIASSNSVPVGAALAIALASCGFGALACYWRSQQKSRKYFHQLHSLKNI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1545 514 Pfam Thioredoxin 51 136 IPR013766 -
Lele52g1545 514 Pfam Erv1 / Alr family 312 405 IPR017905 GO:0016972
Lele52g1545 514 SUPERFAMILY FAD-dependent thiol oxidase 304 408 IPR036774 GO:0016972
Lele52g1545 514 ProSiteProfiles Thioredoxin domain profile. 26 175 IPR013766 -
Lele52g1545 514 Gene3D ERV/ALR sulfhydryl oxidase domain 298 448 IPR036774 GO:0016972
Lele52g1545 514 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 303 405 IPR017905 GO:0016972
Lele52g1545 514 SUPERFAMILY Thioredoxin-like 51 175 IPR036249 -
Lele52g1545 514 Gene3D Glutaredoxin 31 203 - -
Lele52g1545 514 FunFam Sulfhydryl oxidase 33 203 - -
Lele52g1545 514 ProSitePatterns Thioredoxin family active site. 69 87 IPR017937 -
Lele52g1545 514 FunFam Sulfhydryl oxidase 298 449 - -
Lele52g1545 514 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 5 503 IPR039798 GO:0016971
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1545 Lele-ChrLele52 19408066 19414095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1545 52 19408066 19414095 Lele52g1545 52 19408066 19414095 ECH
Lele49g1238 49 8298101 8304931 Lele52g1545 52 19408066 19414095 hybridization
Lele50g1593 50 21041971 21048000 Lele52g1545 52 19408066 19414095 hybridization