Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1238 ATGTCACTGGCCACGTCAGGCATTAGTCTTAGTAGTCAGAAAGGAAAGAAACATCGGAGAAATTTCCTAGTTCAACTTATGGTATTTGGGTGCAAACTGGACCCTCTGCTTCTGCCACCTCAAAGAAGAAAAGTAATTCGCACCCTTTTCAGCCTACTAAACCCTATTGTTCGGAGATCGTTTGCAGCTAGCTTGATCCATCCCGTGTTCTGGGTCCGTGGTCAATCATTTCCATGTCTCCGATCTCATTCGATCCTTCGGGTCGTGACCGATAATAGTAAAAATGGTGATCCCCGAGATTATGCCGTTGATTTGAATGCTACGAGTTTCAGTACAGTTCTGAAGGACACGCCGGCGGCTTTTGTCGTTGTTGAATTCTTTGCCCATTGGACTGATTTTGTAGATTATTTCACTGTTGAAGGATCAGATGCCATTGTTACCATCAGGTGCGCTGCTTGGAGAAATTATAAGCCGCACTATGAAAAGGTTGCAAGGCTCTTTAACGGACCTGATGCAGTGCATCCAGGAATTGTATTGATGGCAAGGGTAGACTGTGCTTTGAAGAATGGATTTCTTCTGCCAATGACTAACGGAATAGTTGAATTTGAAAGCAATGCACAGATAAATACTAAACTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTCTTTGGGGTTCTTCTACTAAATTTGTTGCTGGTGGTTGGGAACCAAAAGAAGACAAAGTTGATATATGGATGATTGATGATGGGCGCACAGCTGATAAGCTGCTTAATTGTATCAGCAAGCAAATGGGCAGTTCATTTGGCTTGGATGATCGGAAATTTGAAAATGAGAATCTTTCATCCAATGTGTCAGACCCTGAACAGATTGCAAGAGCTGTCTATGATGTCGAAGAGGCAACTGACATAGCTTTTGACATCATCTCAGAGCACAAGATGATAAAGCCTGAAACCCTTGCTTTACTCATAAAATTTCTTCAGCTTTTGGTGGCTCAACATCCTTCTATGAGTCAGCTAATAGTCAGGAAGATGACAGTGGAAATGTTGTGGCAAGGAACTTTCGGATTTGTGGAAAAGATGTACCTCGTGGGTACTGGAATATGCCCAAGGGTAGAATGCTATTGGTTATTGATACCAAGTGGCATATCCATATGTTCTGCCGCGGCAGCAAGAATAATACCAGGGGCTTTAGGATGCCTAGTCTTATCATTCTTGTGCCCTCTTTCTCAGCAGCGGTTTATGGGTTCTCCTGCATTCGCTTGCAGTGAGAATCGAGGATGGAGAAATGTGTCTAGTCCAATCAACAAAGCTCGTGACTTTGCTCTATGGTCGTGGAGTGCCCATAATATGGTTAGTGAAAGGTTGATGAAAGAAGAAGCATCTTTGGGAACAGGTGATCCCAAATTTCCAAAGATGATTTGGCGTCCAAAGAAGCTTTGTCCTACTTGTCACCAAGACCTCAACCGAAGGGCCAACAGAATCGAATGGAACAAGGACGAGGTCTACAAGTTTTTGACTCGATACTACGGAGAAAAGCTCTCATATCTATATAAGAACACAAGGGCACAACCGGAAATGATGGAACCGAGGGAGCCGTAG 1605 0.4336 MSLATSGISLSSQKGKKHRRNFLVQLMVFGCKLDPLLLPPQRRKVIRTLFSLLNPIVRRSFAASLIHPVFWVRGQSFPCLRSHSILRVVTDNSKNGDPRDYAVDLNATSFSTVLKDTPAAFVVVEFFAHWTDFVDYFTVEGSDAIVTIRCAAWRNYKPHYEKVARLFNGPDAVHPGIVLMARVDCALKNGFLLPMTNGIVEFESNAQINTKLCDKFSVGHYPMLLWGSSTKFVAGGWEPKEDKVDIWMIDDGRTADKLLNCISKQMGSSFGLDDRKFENENLSSNVSDPEQIARAVYDVEEATDIAFDIISEHKMIKPETLALLIKFLQLLVAQHPSMSQLIVRKMTVEMLWQGTFGFVEKMYLVGTGICPRVECYWLLIPSGISICSAAAARIIPGALGCLVLSFLCPLSQQRFMGSPAFACSENRGWRNVSSPINKARDFALWSWSAHNMVSERLMKEEASLGTGDPKFPKMIWRPKKLCPTCHQDLNRRANRIEWNKDEVYKFLTRYYGEKLSYLYKNTRAQPEMMEPREP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1238 534 Gene3D ERV/ALR sulfhydryl oxidase domain 398 519 IPR036774 GO:0016972
Lele49g1238 534 FunFam Sulfhydryl oxidase 144 295 - -
Lele49g1238 534 SUPERFAMILY FAD-dependent thiol oxidase 435 479 IPR036774 GO:0016972
Lele49g1238 534 Gene3D Glutaredoxin 88 285 - -
Lele49g1238 534 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 436 521 IPR039798 GO:0016971
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1238 Lele-ChrLele49 8298101 8304931 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1238 49 8298101 8304931 Lele49g1238 49 8298101 8304931 ECH
Lele49g1238 49 8298101 8304931 Lele51g1256 51 8322159 8328783 hybridization
Lele49g1238 49 8298101 8304931 Lele52g1545 52 19408066 19414095 hybridization