Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1528 ATGGAGTCCAGCTGTCAGAAAAGGGTTAAGAGAAATGATTACCTTGATAAAGAAAATGGTGATTCCCATGATCTGTCAAATGTCGATGAAGAATTTGATCCATGGACTGCATGGGCTTACAAGCCTCGCACTATTACATTGTTAATGATTGGCGCTTGTTTACTAATTTTTGATGTATATGATGCTAGATGGGCAAGTGGTGCACTCGATCCGGAAAGAGATGCATCTGGTGATCTTGTTACCTCTGTTAAAAGGGGTGTTTGGGCAATGATTGCTGTTTTTCTTGCTTACTGCCTGCTGCAAGCTCCCTCCACGATTCTTATTAGACCGCATCCTGCACTTTGGCGACTGGTCCATGGCATGGCTGTTGTTTACCTTGTGGCCCTCACATTTTTGCTTTTCCAGAAACGTGATGATGCTCGACAGTTTATGAAATTTCTTCATCCTGATCTTGGTGTTGGTAATGAATCTGCTGCTTTTCTTTTAAAACTTCCTGAAAGGTCTTATGGTGCTGATTGTCGCATATACGTGCCAGAAAACCCTACGAGCAGGTTTAAGAATCTTAATGATACACTTTTTGATGAATTTGTTCTTGCTCATATAATTGGTTGGTGGGGGAAGGCTATATTGATCCGTAATCAGCCTCTTCTTTGGGTGTTATCAATTGGCTTCGAGTTGATGGAGTTTACATTTCGCCACATGTTACCGAACTTCAACGAATGCTGGTGGGACAGTATTATTCTTGACATTTTTATCTGCAACTGGTTTGGTATATGGGCAGGAATGCATACTGTTAGGTATTTTGATGGGAAAACATACAAGTGGGTCGGCTTGAGCCGTCAACCTAATATTATGGGAAAAGTGAAACGAACATTAGGGCAATTTACTCCAGCACATTGGGACAAAGATGAGTGGCATCCATTGCTTGGTCCTTGGCGTTTTATTCAAGTGATTAGCCTTTGTATTGTCTTTTTGACTGTAGAGCTCAACACATTCTTTCTCAAGTTTTGTCTCTGGATACCGCCCGGAAATCCCGTCATCATTTATCGGTTGATCTTGTGGTGGTTTATCGCAATTCCAACAATTCGCGAATACAATTCCTACCTTCAAGACAGCAAGCCGGTGAAAAAGGTCGGAGCTTTTTGTTGGCTTTCTCTGGCCATTTGCATTGTTGAACTACTAACTTGTATCAAATTTGGACACGGTTTGTATCCTAAACCGATGCCTTCTTGGCTGGTAAAGTTCTGGTCATCTGTTGGAGTGATCCTTTTATCATGTCTGCTTGTATGGTCGAGGCACTTACACCGAACTATCGGCAAGAAAAAGAGGCGATAA 1335 0.4195 MESSCQKRVKRNDYLDKENGDSHDLSNVDEEFDPWTAWAYKPRTITLLMIGACLLIFDVYDARWASGALDPERDASGDLVTSVKRGVWAMIAVFLAYCLLQAPSTILIRPHPALWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVGNESAAFLLKLPERSYGADCRIYVPENPTSRFKNLNDTLFDEFVLAHIIGWWGKAILIRNQPLLWVLSIGFELMEFTFRHMLPNFNECWWDSIILDIFICNWFGIWAGMHTVRYFDGKTYKWVGLSRQPNIMGKVKRTLGQFTPAHWDKDEWHPLLGPWRFIQVISLCIVFLTVELNTFFLKFCLWIPPGNPVIIYRLILWWFIAIPTIREYNSYLQDSKPVKKVGAFCWLSLAICIVELLTCIKFGHGLYPKPMPSWLVKFWSSVGVILLSCLLVWSRHLHRTIGKKKRR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1528 444 Pfam Phosphatidyl serine synthase 110 399 IPR004277 GO:0006659|GO:0106245
Lele52g1528 444 Coils Coil 444 444 - -
Lele52g1528 444 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 31 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1528 Lele-ChrLele52 19318469 19322101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1528 1 443 Acyl Lipid Metabolism Gene Families AT1G15110 75.450 0.0 688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1528 52 19318469 19322101 Lele52g1528 52 19318469 19322101 ECH
Lele49g1252 49 8370019 8374547 Lele52g1528 52 19318469 19322101 hybridization
Lele50g1575 50 20936426 20942156 Lele52g1528 52 19318469 19322101 hybridization