Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1575 ATGGAGTCCAGCTGTCAGAAAAGGGTTAAGAGAAATGATTACCTTGATAAAGAAAATGGTGATTCCCATGATCTGTCAAATGTCGATGAAGAATTTGATCCATGGACTGCATGGGCTTACAAGCCTCGCACTATTACATTGTTAATGATTGGCGCTTGTTTACTAATATGGGCAAGTGGTGCACTCGATCCAGAAAGTGATGCATCTGGTGATCTTGTTACCTCTGTTAAAAGATCTTTATTCTTTGAATGTGTTCTTACTCTTTTATGTGGTTCGAGTGAGAATCCTGGTTGGATTCTTATTAGACCGCATCCTGCACTTTGGCGACTGGTCCATGGCATGGCTGTTGTTTACCTTGTGGCCCTCACATTTTTGCTTTTCCAGGTCAATTAACTTCCTGAAAGGTCTTATGGTGCTGATTGTCGCATATACGTGCCAGAAAACCGTACGAGCAGTTTACATTTCGCCACATGTTACCGAACTTCAACGAATGCTGGTGGGACAGTATTATTCTTGACATTTTTATCTGCAACTGGTTTGGTGAAACGAACATTAGGACAATTTACTCCAGCACATTGGGACAAAGATGAGTGGCATCCATTGCTTGGTCCTTGGCGTTTTGTTCAAGTGATTAGTCTTTGTATTGTCTTTTTGACTGTAGAGCTCAACACATTCTTTCTCAAGTTTTGTCTCTGGATACCGCCCCGAAATCCCGTCATCAGTTATCGGTTGATCTTGTGGTGGTTTATCGCAATTCCAACAATTCGCGAACACAATTCCTACCTTCAAGACAGAGCTGATGAGTTTGTTCGTGCCATTAATCAACAAATGGTTGAAATGGAGAAAGAAGTGTACAAAAGTCCAAGGACGAGGGCCATGAGATCGGCCATAGCCTCGGAGGTCGAGGGCGAATCAATCGAAACCCATCCGAGGGAAGATAAGGGTAGCTTGGAAGGTTCAGCTGATGTCGTTTCAGTAACCGTGGTCCATGAAGACGACGGCTAA 1005 0.4338 MESSCQKRVKRNDYLDKENGDSHDLSNVDEEFDPWTAWAYKPRTITLLMIGACLLIWASGALDPESDASGDLVTSVKRSLFFECVLTLLCGSSENPGWILIRPHPALWRLVHGMAVVYLVALTFLLFQVNXLPERSYGADCRIYVPENRTSSLHFATCYRTSTNAGGTVLFLTFLSATGLVKRTLGQFTPAHWDKDEWHPLLGPWRFVQVISLCIVFLTVELNTFFLKFCLWIPPRNPVISYRLILWWFIAIPTIREHNSYLQDRADEFVRAINQQMVEMEKEVYKSPRTRAMRSAIASEVEGESIETHPREDKGSLEGSADVVSVTVVHEDDG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1575 334 MobiDBLite consensus disorder prediction 304 318 - -
Lele50g1575 334 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 158 267 - -
Lele50g1575 334 MobiDBLite consensus disorder prediction 298 319 - -
Lele50g1575 334 Pfam Phosphatidyl serine synthase 177 266 IPR004277 GO:0006659|GO:0106245
Lele50g1575 334 Pfam Phosphatidyl serine synthase 103 129 IPR004277 GO:0006659|GO:0106245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1575 Lele-ChrLele50 20936426 20942156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1575 179 265 Acyl Lipid Metabolism Gene Families AT1G15110 87.356 2.36e-49 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1575 50 20936426 20942156 Lele50g1575 50 20936426 20942156 ECH
Lele50g1575 50 20936426 20942156 Lele51g1268 51 8384539 8388718 hybridization
Lele50g1575 50 20936426 20942156 Lele52g1528 52 19318469 19322101 hybridization