Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1519 ATGGCAAGTAAACTTCAAATTTCAGAAGATGAAGGAGTTTCGTACCTCCCTCTCGCCGCCGCCGCAACTGGAGACGGCGACGCCGAGGGGAACAATCCCGATAACCTACGACTCAAGCAGCTCGGATACAAGCAAGAGCTCAGCCGGAGCCTGTCGGCGGTGGCGAACTTCTCGATGGCGTTTTCGATCGTTTCGGTGCTTACGGGGCTGACGACGTTGTACGGAACGGGACTTAGGTTCGGTGGTCCGGTGACGATGGTGTATGGATGGTTGATTGTGGGAGCGATGACGATGACGGTGGGTCTATCTATGGCTGAGATTTGTTCTGCGTTTCCGACTTCTGGAGGCCTCTACTTCTGGAGCGCGAGGCTGTGTGGTCGCCGTTGGGGCCCTCTTGCTTCTTGGCTCACTGGCTGAAGCACTGCTAAGGAGGTTGTGGATGTCTTTGAAAATAGTGCATACGATGACCTAGTCGTCGGTAAGGACTTCAAGACCCCAGATTTGAAGAGTGCTGGATGCTTCAAAGATAGAGTTACTTCGTTTTGTGATCCATAG 555 0.5333 MASKLQISEDEGVSYLPLAAAATGDGDAEGNNPDNLRLKQLGYKQELSRSLSAVANFSMAFSIVSVLTGLTTLYGTGLRFGGPVTMVYGWLIVGAMTMTVGLSMAEICSAFPTSGGLYFWSARLCGRRWGPLASWLTGXSTAKEVVDVFENSAYDDLVVGKDFKTPDLKSAGCFKDRVTSFCDP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1519 184 PANTHER AMINO-ACID PERMEASE BAT1 26 140 - -
Lele52g1519 184 Pfam Amino acid permease 52 137 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele52g1519 184 Gene3D Amino acid/polyamine transporter I 46 142 - -
Lele52g1519 184 FunFam Amino-acid permease BAT1 47 139 - -
Lele52g1519 184 ProSitePatterns Amino acid permeases signature. 81 112 IPR004840 GO:0006865|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1519 Lele-ChrLele52 19197895 19202104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1519 98 138 Organic Solute Cotransporters AT2G01170 78.049 2.05e-16 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1519 52 19197895 19202104 Lele52g1519 52 19197895 19202104 ECH
Lele50g1565 50 20836603 20837129 Lele52g1519 52 19197895 19202104 hybridization