Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1565 ATGGCAAGTAAACTTCAAATTTCAGAAGATGGAGGAGTTTCGTACCTCCCTCTCGCCGCCGCCGCCGCAACTGGAGACGGTGACGCTGAGGTGAACAATCCCGATAACCTACGACTCAAGCAGCTCGGATACAAGCAAGAGCTCAGCCGGAGCCTGGCGGTAGCGAACTTCTCGATGGCGTTCTCGATCGTTTCGGTACTTACGGGGCTGACGACGTTGTACGGGACGGGACTTAGGTTCGGCGGTCCGGTGACGATGGTGTATGGATGGTTGATTGTGGGAGCGATGACGATGACGGTGGGTCTATCTATGGCTGAGATTTGTTCTGCGTTTCCAACTTCTGGAGGCCTCTACTTCTGGAGCGCGAGGCTGTGTGGTCGCCGTTGGGGCCCTCTTGCTTCTTGGCTCACTGGCTGGTGA 420 0.5643 MASKLQISEDGGVSYLPLAAAAATGDGDAEVNNPDNLRLKQLGYKQELSRSLAVANFSMAFSIVSVLTGLTTLYGTGLRFGGPVTMVYGWLIVGAMTMTVGLSMAEICSAFPTSGGLYFWSARLCGRRWGPLASWLTGW 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1565 139 Pfam Amino acid permease 56 137 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele50g1565 139 Gene3D Amino acid/polyamine transporter I 50 139 - -
Lele50g1565 139 FunFam Amino-acid permease BAT1 47 139 - -
Lele50g1565 139 PANTHER AMINO-ACID PERMEASE BAT1 25 139 - -
Lele50g1565 139 ProSitePatterns Amino acid permeases signature. 81 112 IPR004840 GO:0006865|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1565 Lele-ChrLele50 20836603 20837129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1565 98 139 Organic Solute Cotransporters AT2G01170 78.571 8.11e-18 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1565 50 20836603 20837129 Lele50g1565 50 20836603 20837129 ECH
Lele50g1565 50 20836603 20837129 Lele52g1519 52 19197895 19202104 hybridization