Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1182 ATGGCTCATATTGATGGCCAGGTAAAGTGTGAGAAATGGATTCGTGATGACGACAACCACTCTGAAGAGTCGAAGGTGTCATGGTGGTTAAATAGACTTATAGGGAGAAAGAAAAAGGTGACTGTAGATTGGCCCTATCCTTTTGGTGAGGGAAAATTATTTGTTATCACCTTAAGTGCTGGCTTGGAAGGTTACCATGTCAATGTGGATGGGAGGCATGTGACGTCATTTCCTTATCGAACAGGATTCACTCTTGAGGATGCTACTGGACTATCTGTGAATGGGGATATTGATGTGCATGCTGTTTATGCTGCTTCATTAACGACATCACATCCGAGTTTCGCTTCTCAGATGCATCTTGAAATGCTTCCTCAATGGAAAGCTCTGCCTCTCGTTAATGTGAATGTGGAGCTTTTCATTGGAATCCTTTCTGCTGGGAACCATTTTGCAGAACGGATGGCAGTGAGGAAGTCTTGGATGCAACATAAGTTAATCAAGTCTTCCCTTGTTGTGGCTAGATTCTTTGTAGCCTTGATTCGTTCAATTGCTGCTGAGTATATTATGAAGTGTGATGATGATACATTTGTCAGGGTGGATTCAATCATCAGGGAAGCAAGAAAAGTTCCAAGAGATAGAAGTCTTTATATTGGAAATATGAATTACCACCATAGGCCTCTTCGCCACGGTAAATGGGCAGTAACATATGAGGAATGGCTGGAGGAAGAGTATCCTCCCTACGCTAATGGCCCGGGTTACATCGTCTCATCTGACATTGCTGAGTTCATCGTATCTGAGTTCGAGAAGCACAGATTAAACTTGTTCAAAATGGAGGATCATATGGGAAAGTGA 849 0.4264 MAHIDGQVKCEKWIRDDDNHSEESKVSWWLNRLIGRKKKVTVDWPYPFGEGKLFVITLSAGLEGYHVNVDGRHVTSFPYRTGFTLEDATGLSVNGDIDVHAVYAASLTTSHPSFASQMHLEMLPQWKALPLVNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSLVVARFFVALIRSIAAEYIMKCDDDTFVRVDSIIREARKVPRDRSLYIGNMNYHHRPLRHGKWAVTYEEWLEEEYPPYANGPGYIVSSDIAEFIVSEFEKHRLNLFKMEDHMGK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1182 282 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 174 280 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele52g1182 282 Pfam Galactosyltransferase 184 279 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele52g1182 282 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 1 105 IPR001079 GO:0030246
Lele52g1182 282 Pfam Galactoside-binding lectin 29 103 IPR001079 GO:0030246
Lele52g1182 282 FunFam Hydroxyproline O-galactosyltransferase GALT2 19 103 - -
Lele52g1182 282 Gene3D - 14 103 - -
Lele52g1182 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 103 IPR013320 -
Lele52g1182 282 Gene3D - 162 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1182 Lele-ChrLele52 8334768 8338941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1182 4 278 Glycosyltransferase AT1G74800 64.151 7.19e-146 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1182 52 8334768 8338941 Lele52g1182 52 8334768 8338941 ECH
Lele50g1210 50 8482420 8486883 Lele52g1182 52 8334768 8338941 hybridization