Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1210 ATGAAGAGAGGGAAGTTAGAGCTCTCGGTGGTACCCAATAGGTTCAGGCTACTTCAAATTCTGATGGGCGTAATCTTGCTTTACTTTCTACTCATGAGCTTCGAAATCCCTCTTGTTCTCCGAACAGGGTTTTCGTCACTTTCTTCTTTTGATACTGCTTCTGGGTTTCTCAGTGACGCATTTCCTAGGCCTATGTTGTTCGACGCGGACGAGGAACAACTTGCAAATAGTATCACATCAATTCGACCCTCAGAGGAATTATTTCGGGGTTCTCAAGGATCACGGTACCGAAAACCCGAGCGTCAAATGCACGAGTTGAAGAAAATTTCTGGTTTAGTCTTCAACTACACTTTATCCGACGCTAATGCAGCGAATACAAATGGATTTTCTGAACTTCGAAAGTCAGCGAGACATGCTTGGGTAGTGGGAAAGAAGCTCTGGGAAGAAGTAGAGAGTGGAAAAATCGCGAATGAGACGAAGTCTAAGCCTGATAATCATTTGGACTCATGCCCACACTCGATTTCGCTGTCGGGGTCGGAATTTCGAGAGCAGAAAGGCGTAATGGTGCTGCCGTGTGGGTTGACACTGTGGTCGCACCTTACGGTGGTTGGGACGCCGCGTTGGGCTCACGCCGAGCATGATCCCAAGATAGCGATAGTGAAGGAAGGGGATGACTCAATTATGGTGTCGCAGTTCATGATGGAGTTGCAGGGTTTGAAGACTGTGGACAACGAGGAACCGCCTAGGATTCTGCATTTCAATCCGAGGTTGAAAGGGGATTGGAGTGGGAAACCAGTGATTGAGCAGAACACTTGCTACAGAATGCAGTGGGGTTCTGCCCTCAGGTGTGAGGGATGGAAATCTCGGGCCGATGAGGAAACTGTTGATGGCCAGGTAAAGTGTGAGAAGTGGATTCGTGATGACGACAACCACTCTGAAGAGTCGAAGGTGTCATGGTGGTTAAATAGACTGATAGGGAGAAAGAAGAAGGTGACTGTAGATTGGCCCTATCCTTTTGCTGAGGGAAAATTATTTGTTATCACCTTAAGTGCTGGCTTGGAAGGCTACCATGTCAATGTGGATGGGAGGCATGTGACATCGTTTCCTTATCGAACAGGATTCACTCTTGAGGATGCTACTGGACTATCTGTGAATGGGGATATCGATGTGCATGCTGTTTATGCTGCTTCATTAACGACATCACATCCCAGTTTCGCTCCTCAGATGCATCTTGAAATGCTTCCTCAATGGAAAGCTCCGCCTCTCGTTAATGTGAATGTGGAGCTTTTCATTGGAATCCTTTCTGCCGGGAACCATTTTGCAGAACGGATGGCAGTGAGGAAGTCTTGGATGCAACATAAGTTAATCAAGTCTTCTCTTGTTGTGGCCAGATTCTTTGTAGCCTTGCATGGAAGAAAGGATATAAATGTTGAGATAAAGAAAGAAGCAGAGTATTTTGGTGATATCATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACTATAGCTATCTGTGAATATGGGATTCGTTCAATTGCTGCTGAGTATATTATGAAGTGCGATGATGATACATTTGTCAGGGTGGATTCAATGATCAGGGAAGCAAGAAAAGTTCCAAGAGATAGAAGTCTTTATATTGGAAATATGAATTACCACCATAGGCCTCTTCGCCATGGTAAATGGGCAGTAACATATGAGGAATGGCTGGAGGAAGAGTATCCTCCCTATGCTAATGGCCCGGGTTACATCGTGTCATCTGACATTGCTGAGTTCATCGTATCTGAGTTCGAGAAGCACAGATTAAATTTGTTCAAAATGGAGGATGTGAGCATGGGAATGTGGGTAGAGCAGTTCAACACCTCAAGACCGGTGGAATACGTGCACAGCTTGAAGTTCTGCCAATTCGGGTGCATCGAAGATTACTACACAGCACATTACCAGTCTCCGCGACAGATGACATGTATGTGGGACAAGTTGCAGGTTCAAGGAAATCCCCTCTGCTGCAACGTGAGATGA 2028 0.4561 MKRGKLELSVVPNRFRLLQILMGVILLYFLLMSFEIPLVLRTGFSSLSSFDTASGFLSDAFPRPMLFDADEEQLANSITSIRPSEELFRGSQGSRYRKPERQMHELKKISGLVFNYTLSDANAANTNGFSELRKSARHAWVVGKKLWEEVESGKIANETKSKPDNHLDSCPHSISLSGSEFREQKGVMVLPCGLTLWSHLTVVGTPRWAHAEHDPKIAIVKEGDDSIMVSQFMMELQGLKTVDNEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGQVKCEKWIRDDDNHSEESKVSWWLNRLIGRKKKVTVDWPYPFAEGKLFVITLSAGLEGYHVNVDGRHVTSFPYRTGFTLEDATGLSVNGDIDVHAVYAASLTTSHPSFAPQMHLEMLPQWKAPPLVNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSLVVARFFVALHGRKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRSIAAEYIMKCDDDTFVRVDSMIREARKVPRDRSLYIGNMNYHHRPLRHGKWAVTYEEWLEEEYPPYANGPGYIVSSDIAEFIVSEFEKHRLNLFKMEDVSMGMWVEQFNTSRPVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQVQGNPLCCNVR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1210 675 Gene3D - 220 394 - -
Lele50g1210 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 188 394 IPR013320 -
Lele50g1210 675 SMART Gal_bind_lectin_2 190 395 IPR001079 GO:0030246
Lele50g1210 675 Pfam Galactoside-binding lectin 187 394 IPR001079 GO:0030246
Lele50g1210 675 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 377 625 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele50g1210 675 Pfam Galactosyltransferase 442 624 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele50g1210 675 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 186 396 IPR001079 GO:0030246
Lele50g1210 675 FunFam Hydroxyproline O-galactosyltransferase GALT2 310 394 - -
Lele50g1210 675 Gene3D - 422 664 - -
Lele50g1210 675 CDD GLECT 190 393 IPR001079 GO:0030246
Lele50g1210 675 FunFam Hydroxyproline O-galactosyltransferase GALT4 185 303 - -
Lele50g1210 675 FunFam Hydroxyproline O-galactosyltransferase 420 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1210 Lele-ChrLele50 8482420 8486883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1210 16 675 Glycosyltransferase AT1G74800 62.798 0.0 862
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1210 50 8482420 8486883 Lele50g1210 50 8482420 8486883 ECH
Lele50g1210 50 8482420 8486883 Lele52g1182 52 8334768 8338941 hybridization