Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1180 ATGGAGTTCACCCCATACTCGACCCCGAAAGGATCTATTTCATTGAGTATAGGAGATATCTCTGAGCTCGAGTCAAATCTCACTCTCAGCGATAAGCTAAAGATCTTCAAGAGCTCCTCCTTTGATCCCAATGAATACGTCACTACCAAATCTCGTAGCATGGCCGAGAAGGACATAAAACTTGCCTGCCATTACCTCCATGACTTGAAAAGGGCTTCAGCAGAAGAAATGCGCAAGAGTGTTCTTGCTAATTATTCAGCCTTCATACGTACATCAAAAGAGATCTCAGATCTTGAGGGGGAGCTACTTTCAATGAGAAATCTCCTATCCTCTCAGGCAGCTTTAGTTCATGGCTTAGCAGACAGAAGCCGGCTTGGTTCTTTAATCGCTGAAGCCAAAGATTCTGATAAAGAGAACATGCTTAATGAGAAAGCGGACCAATCCAAGACAGAGAATTCGATCACAGGATATCTTGAGAAGCTTGAGGTCCTATTAGCCGAGAAAAGAATAGAAGAAGCCATGACTTCCTTACAAGAGGGAGATGCCATGGTAGCAGAAATTAGAGACAAAAAAGCTTTAAGTCCCAGTGCGTTGGTTGTATTACAAGCTGCTGTTACAGAACACAGAACTAAATTAGCTGATCAGCTTGCAGAAATTATATGCCAGCCCTCAACTCGTAGTTCTGAGCTTCGTTCATCGGCTATAGCTTTAAAAAATCTAGGAGATGGTCCTCGTGCACACACATTACTTCTAAATTCTCACCAAGAGAAGTTACAACGTACCCTGCAGAGTCTTAGGTCTGCCTCACATACTGGAGGAGCATACACAGCCAAGCTCTCAAAGCTTGTGTTTTCCACCATTTCACAAGCAATGAATGATTCCTTGACAGTGTTTGGTCAAGAAGAGCCTGCATATTCTTCTGAGTTAGTGACTTGGGCTGTAAAGCAGGCCTATCACCTTGTCTCTCTCATCAAGAAACATGTTCTGTTATCTACATCATCTGCTGGGAGCTTGAGAGTTTCTTCTGACTGTGTTCGTGTTTGCTTGAGTCACTGTTACATCTTAGAGGCTCAAGGGTTAGCACTTTCTCCCGTGTTGTTGAAACAATTCAGGCCCTTTGTTGAGAGTGCACTCGACACAAACTTGAAAAGAATCGAACAATGTTGTGCGGCTAGAGCTGCTGCAGATGATTGGCTGCTTGCTTATTCACCTAGCAGCAGGTTTACTGGGTTAACTTCTGCTTCCTTGACGAACGCATCCCAAGCACCCAAGCTTTCTAGCAGTGCTCATAAGTTTAACTCAATGATTCAGGAGTTTTTCGAAGACGTTGGACCTCTAGAATTCCTAGAGTTGGATAATCTTGCATATGAAGGTCTTCTTCACCTGGTCAAATCATATGTCAATCTATTAATAAATGCACTACCAGGTTCAGTGGAAACTGAGAACTTGGAAGGCACAGGGCCAAAAATTGTTAGGGTAGCTGAGACAGAAGCACAACAAGTGGCATTGCTGGCAAATGCATTGTTGCTAGCAGATGAGTTGATCCCACGTTCCGTCGTGAAGGTTTTTCAAAGCACCAAAAGTGATGAATCCCAGAAAAGAGCAGGACCAGAGAAACATCAGAAGGCTCCTGAGCAGAGGGAGCTCAAGAAAAGGCTCCAGCGTGAAGTTGATCGCCTGAGGGATAGCTTCTGCAGGCAGCATGCTCTTGAACTCATTTTCACAGAAGATGGGCACACTCGTTTGAATGCATTTATGTATTTGAGTATGGATAGTCATGCAGAGGAGCCTGAGTGGTTTCCTTCTCCAATTTTTCAGGAGCTGTTTTTAAAACTTTCTCGAATGGCAAGCATTGCTACAGATATGTTTGTGGGTAGGGAAAGGTTTGCTACTACTTTGCTAATGAGAATGTCAGAAACAGTTATTCTGTGGCTTTCTGAAGATCAAGCATTCTGGGATGAGATTGAGACAGGTCAAGTGCCTTTAGGTGCTTTTGGCCTTCGACAGCTTTATTTGGATATGCAGTTTGTGATAATATTTGCATCCCAAGGTCGTTACTTATCTCGTCAGCTTTCCCAAGTTATTAAAAACATGATTGCTAGGGCCATTGAAGCTGTTGCTGCGTCTGGGTTAGATCCTAACAGTGTCCTGCCAGAGGATGAATGGTTTGTTGAAGTTTCTCAAATAGCTGTAGAGATGATAAATGGGAAACATACGTTTGGCCATGTTGAGAGAGAAGTTACCAGCCCTACGGCTTCTATATCAGGAAGGTCAATGTCTTCAATCCATTCTCATGGAAGTAACTAA 2307 0.4335 MEFTPYSTPKGSISLSIGDISELESNLTLSDKLKIFKSSSFDPNEYVTTKSRSMAEKDIKLACHYLHDLKRASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSSQAALVHGLADRSRLGSLIAEAKDSDKENMLNEKADQSKTENSITGYLEKLEVLLAEKRIEEAMTSLQEGDAMVAEIRDKKALSPSALVVLQAAVTEHRTKLADQLAEIICQPSTRSSELRSSAIALKNLGDGPRAHTLLLNSHQEKLQRTLQSLRSASHTGGAYTAKLSKLVFSTISQAMNDSLTVFGQEEPAYSSELVTWAVKQAYHLVSLIKKHVLLSTSSAGSLRVSSDCVRVCLSHCYILEAQGLALSPVLLKQFRPFVESALDTNLKRIEQCCAARAAADDWLLAYSPSSRFTGLTSASLTNASQAPKLSSSAHKFNSMIQEFFEDVGPLEFLELDNLAYEGLLHLVKSYVNLLINALPGSVETENLEGTGPKIVRVAETEAQQVALLANALLLADELIPRSVVKVFQSTKSDESQKRAGPEKHQKAPEQRELKKRLQREVDRLRDSFCRQHALELIFTEDGHTRLNAFMYLSMDSHAEEPEWFPSPIFQELFLKLSRMASIATDMFVGRERFATTLLMRMSETVILWLSEDQAFWDEIETGQVPLGAFGLRQLYLDMQFVIIFASQGRYLSRQLSQVIKNMIARAIEAVAASGLDPNSVLPEDEWFVEVSQIAVEMINGKHTFGHVEREVTSPTASISGRSMSSIHSHGSN 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1180 768 Pfam Vps51/Vps67 36 113 - -
Lele52g1180 768 Coils Coil 543 563 - -
Lele52g1180 768 Pfam Exocyst component 84 C-terminal 154 362 IPR032403 -
Lele52g1180 768 SUPERFAMILY Cullin repeat-like 146 378 IPR016159 -
Lele52g1180 768 Gene3D - 272 375 IPR042560 -
Lele52g1180 768 PANTHER EXOCYST COMPLEX COMPONENT 8 27 761 IPR033961 GO:0000145|GO:0006887
Lele52g1180 768 Gene3D - 142 264 IPR042561 -
Lele52g1180 768 MobiDBLite consensus disorder prediction 526 549 - -
Lele52g1180 768 MobiDBLite consensus disorder prediction 527 549 - -
Lele52g1180 768 MobiDBLite consensus disorder prediction 747 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1180 Lele-ChrLele52 8316816 8324166 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1180 52 8316816 8324166 Lele52g1180 52 8316816 8324166 ECH
Lele49g1114 49 7391821 7398695 Lele52g1180 52 8316816 8324166 hybridization
Lele50g1208 50 8456673 8463615 Lele52g1180 52 8316816 8324166 hybridization