Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1114 ATGGACTACACCCCATATGCGACCCCGAAAGGATCTATTTCATTGAGTATAGGAGATATATCTGAGCTCGAGTCCAATCTCACTCTCAGCGATAAGCTAAAGATCTTCAAGAGCTCCTCCTTTGATCCCAATGAATACGTCACTACCAAATCTCGTAGCATGGCCGAGAAGGACATAAAAATTGCCTGCCATTACCTTCATGACTTGAAAAGGGCTTCAGCAGAAGAAATGCGCAAGAGTGTTCTTGCTAATTATTCAGCCTTCATACGCACATCAAAAGAGATCTCAGATCTTGAGGGGGAGCTACTTTCCATGAGAAATCTCCTATCCACTCAGGCAGCTTTGGTTCATGGTTTAGCAGACAGAAGCCGGCTTGGTTCTTTAATCGCTGAAGCCAAAGATTCTGATAAAGAGAACATGCTTAATGAAGAAGCAGACCAATCCAAGACAGAGAATTCGATCACAGGATATCTTGAGAAGCTCGAAGTCCTATTAGCCGAGAAAAGAATAGAAGAAGCAATGACTTCCTTACAAGAGGGAGATGCCATGGTAGCAGAAATTAGAGACAAAAAATCTTTAAGTCCAAGTGCGTTGGTTGTATTACAAGCTGCTGTTACAGAACACAGAACTAAATTAGCTGATCAGCTTGCAGAAATTATATGCCAGCCTTCAACTCGTAGTTCTGAGCTTCGTTCATCTGCTATAGCTTTAAAAAATCTAGGAGACGGTCCTCGTGCACACACATTACTCCTAAATTCTCACCAAGAGAAGTTACAACGTACCCTGCAGAGTCTTAGGTCTGTCTCACATAGTGGAGGAGCATACACAGCCAAGGTCTCAAAGCTTGTGTTTTCCACCGTTTCGCAAGGAATGAATGATTCCTTGACAGTGTTTGGTCAAGAAGACCCTGCATATTCTTCTGAGTTAGTGACTTGGGCTGTAAAGCAGGCGGACCACCTTGTCTCTCTCATCAAGAAACATGTTCTGTTATCTACATCATCTGCTGGAAGCTTGAGAGTTTCTTCTGACTGTGTTCTTGTTTGTTTGAGTCACTGTTACATCTTAGAGGCTCAAGGGTTAGCACTTTCTCCCGTGTTGTTGAAACAATTCAGGCCCTTTGTTGAGACTGCACTGGACACAAACTTAAAAAGAATCGAACAATGTTGTGCTGCTAGAGCTGCTGCAGATGATTGGTTGCTTGCTTATTCACCTAGCAGCAGGTTTTCTGGGTTAACTTCTGCTTCATTCACGAACGCATCCCAATCACCCAAGCTTTCTAGCAGCGCTCATAAGTTTAACGCAATGATTCAGGAGTTTTTTGAAGATGTTGGGCCTCTAGAATTCCTAGATTTGGATAATCTTGCATTTGAAGGTCTTCTTCACCTGTTCAAATGCTATGTCAATCTCTTAATAAATGCACTACCAGGTTCAGTGGAAACTGAGAACTTGGAAGGCACAGGGCCAAAACTTGTTAGGGTAGCTGAGACAGAAGCACAACAAGTGGCATTGCTGGCAAATGCATTGTTGCTGGCAGATGAGTTGATCCCACGTTCCGTCGTGAAGGTTTTTCAAAGCACAAAAAGTGATGAATCCCAGAAAAGAGCAGGACCAGAAAAACATCAGAAGGCTCCTGAACAGAGAGAGCTGAAGAAAAGGCTCCAGCGTGAAGTTGATCGCCTGAGAGATAGCTTCTGCAGGCAACATGCTCTTGAACTCATTTTCACAGAAGATGGGAGCAGTCGTTTGAATGCATTGATGTATTTGAGTATGGATAGTCATGCAGAGGAGCCTGAGTGGTTTCCTTCTCCAATTTTTCAGGAGCTGTTTTTAAAACTTTCTCGAATGGCAAGCATTGCCACAGATATGTTTGTGGGTAGGGAAAGGTTTGCTACTACTTTACTAATGAGAATGTCAGAAACAGTGATTCTTTGGCTTTCTGAAGATCAAGCATTCTGGGATGAGATTGAAGCAGGTCAAGTGCCTTTAGGTGGTTTTGGCCTTCGACAGCTTTATTTGGATATGCAGTTTGTGATAATATTTGCATCCCAAGGTCGTTACTTATCTCGTCAGCTTTCCCAAGTTATTAAAAACATGATTGCTAGGGCCATTGAGGCTGTTGCTGCTTCTGGGTTAGATCCTAACAGTGTCCTGCCAGAGGATGAATGGTTTGTTGAAGTTTCTCAAATAGCTGTGGAGATGATAAATGGGAAAAATACGTTTGGCCATGTTGATAGAGAAGTTACCAGTCCTACCGCTTCTATATCAGGAAGGTCAATGTCTTCAATCCATTCTCATGGAAGTAGCTCCATTATATTTAATTTTGATCCATTTATCACTTTTGTGTTAAAGAATCTGATATCAAATACTCAAATCAGACCTTCTGCCTTACTTGATATTTGCACTTTGCAGATTACCAAAAGCGAGATGTGGAGAATATATCAAACTGCTGCCTCGAGGTTCAGCCAAAAAGATCCACAGAATACTGCTGATGCAGAATGGGGATCTGATATTGTTTTAGCATTGTCCAAGACTTTATTTTCTCTGATTCTTTTAACAAAATGTTGTCTTCCACTGTAG 2577 0.4203 MDYTPYATPKGSISLSIGDISELESNLTLSDKLKIFKSSSFDPNEYVTTKSRSMAEKDIKIACHYLHDLKRASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADRSRLGSLIAEAKDSDKENMLNEEADQSKTENSITGYLEKLEVLLAEKRIEEAMTSLQEGDAMVAEIRDKKSLSPSALVVLQAAVTEHRTKLADQLAEIICQPSTRSSELRSSAIALKNLGDGPRAHTLLLNSHQEKLQRTLQSLRSVSHSGGAYTAKVSKLVFSTVSQGMNDSLTVFGQEDPAYSSELVTWAVKQADHLVSLIKKHVLLSTSSAGSLRVSSDCVLVCLSHCYILEAQGLALSPVLLKQFRPFVETALDTNLKRIEQCCAARAAADDWLLAYSPSSRFSGLTSASFTNASQSPKLSSSAHKFNAMIQEFFEDVGPLEFLDLDNLAFEGLLHLFKCYVNLLINALPGSVETENLEGTGPKLVRVAETEAQQVALLANALLLADELIPRSVVKVFQSTKSDESQKRAGPEKHQKAPEQRELKKRLQREVDRLRDSFCRQHALELIFTEDGSSRLNALMYLSMDSHAEEPEWFPSPIFQELFLKLSRMASIATDMFVGRERFATTLLMRMSETVILWLSEDQAFWDEIEAGQVPLGGFGLRQLYLDMQFVIIFASQGRYLSRQLSQVIKNMIARAIEAVAASGLDPNSVLPEDEWFVEVSQIAVEMINGKNTFGHVDREVTSPTASISGRSMSSIHSHGSSSIIFNFDPFITFVLKNLISNTQIRPSALLDICTLQITKSEMWRIYQTAASRFSQKDPQNTADAEWGSDIVLALSKTLFSLILLTKCCLPL 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1114 858 SUPERFAMILY Cullin repeat-like 146 378 IPR016159 -
Lele49g1114 858 Coils Coil 543 563 - -
Lele49g1114 858 Gene3D - 271 375 IPR042560 -
Lele49g1114 858 PANTHER EXOCYST COMPLEX COMPONENT 8 27 761 IPR033961 GO:0000145|GO:0006887
Lele49g1114 858 MobiDBLite consensus disorder prediction 526 549 - -
Lele49g1114 858 Gene3D - 143 264 IPR042561 -
Lele49g1114 858 MobiDBLite consensus disorder prediction 527 549 - -
Lele49g1114 858 Pfam Vps51/Vps67 36 114 - -
Lele49g1114 858 Pfam Exocyst component 84 C-terminal 154 362 IPR032403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1114 Lele-ChrLele49 7391821 7398695 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1114 49 7391821 7398695 Lele49g1114 49 7391821 7398695 ECH
Lele49g1114 49 7391821 7398695 Lele51g1132 51 7504948 7511823 hybridization
Lele49g1114 49 7391821 7398695 Lele52g1180 52 8316816 8324166 hybridization