Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1075 ATGTTACCCCACAATCAAAAGCGTAAAAATTCTGTTACAGAGTCTACAGATTTTAATGAGCTAGTGGAGAAGGAACCGTGGCTTTCAACTTCCAAATTGGTCGTGAAACCTGACATGTTGTTTGGAAAGCATGGTAAAAGCGGTTTGGTTGCCTTGAATTTGGATTTGGCACAAGTTGCTTCTTTTGTGAAAGAGCGTCTTGGCAAAGAGAAGTATTTGGTCATAAATTTCTGTTACGTAAAGGTTGAGATGAGTGGATGCAAAGGACCCGTAACAACCTTCATTGTTGAACCTTTCATCCCACAATATGAAGAGTTCTACCTTAACATTGTCTCAGAGAGACTTGGGAACAGTATGAGCTTTTCAGAATGCGGAGGAATTGAAATTGAAAAGAACTGGGATAAGGTTAAGACAATATTTGTTCCAACAGGAGTGTATCTTACATCTGAAACCATTGCTCCGCTGGTTCCAACCCTTCCCTTGGAGATCTGGGGAGAAATTGAGGAATTCCTCAAGGTGGTTTTTGCTCTATTTCAAGACCTGGATTTCACTTTCCTAGAAATGAACCCTTTCACATTGGTCAATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAAAGATGGAGAAACATTGAATTTCCAATGCCGTTTGGAAGGGTTACGAGTCCCACACAGAGTTTCATTCACGGATTAGATGAAAAGGTTGGAGATCTTGGATATGCATCTGAGCTTGGAAACTACGCAGAATACAGCGGTGCACCTAAAGAAGAGGAGGTCTTGCAGTATGCCAGAGTTGTAATTGATGTAAGCAAACCTTATCTTCATTGTGCAACTGCAAAATCTGATGACCACAAGAGAGCACCTGTGATTGGAGGAGGGATAGCAGACTTCACTGATGTTTCTGCTACATTTAGCGGCATAATTCGAGTACTTAAGGAGAAGGAGGAACAGCTAAAAGCTGCAATGATGCACATATACGTGAGGAGAGGAGGTCCCAACTATCAGAAAGGTCTAGCGAAAATGCGGGCGCTCGGAGAAAACATCGGCATCCCTATTGAGGTTTATGGACCAGAAGAAACCATGACTGGTATATGCAAGCAGGCAATCCAATGCATCACTGCAGCTGCTTAA 1164 0.4253 MLPHNQKRKNSVTESTDFNELVEKEPWLSTSKLVVKPDMLFGKHGKSGLVALNLDLAQVASFVKERLGKEKYLVINFCYVKVEMSGCKGPVTTFIVEPFIPQYEEFYLNIVSERLGNSMSFSECGGIEIEKNWDKVKTIFVPTGVYLTSETIAPLVPTLPLEIWGEIEEFLKVVFALFQDLDFTFLEMNPFTLVNGKPYPLDMRGELDDTAAFKNFKRWRNIEFPMPFGRVTSPTQSFIHGLDEKVGDLGYASELGNYAEYSGAPKEEEVLQYARVVIDVSKPYLHCATAKSDDHKRAPVIGGGIADFTDVSATFSGIIRVLKEKEEQLKAAMMHIYVRRGGPNYQKGLAKMRALGENIGIPIEVYGPEETMTGICKQAIQCITAAA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1075 387 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 15 225 - -
Lele52g1075 387 Gene3D - 2 222 - -
Lele52g1075 387 FunFam ATP-citrate synthase alpha chain protein 4 222 - -
Lele52g1075 387 Pfam ATP citrate lyase citrate-binding 245 381 IPR032263 -
Lele52g1075 387 Pfam ATP-grasp domain 17 192 IPR013650 -
Lele52g1075 387 Gene3D - 242 386 IPR016102 -
Lele52g1075 387 FunFam ATP-citrate synthase alpha chain protein 244 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1075 Lele-ChrLele52 7223221 7225996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1075 8 387 Acyl Lipid Metabolism Gene Families AT1G10670 72.087 0.0 589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1075 52 7223221 7225996 Lele52g1075 52 7223221 7225996 ECH
Lele49g1018 49 6529242 6532540 Lele52g1075 52 7223221 7225996 hybridization