Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1018 ATGGCGCGCAAGAAGATCAGAGAGTACGACTCCAAGAGACTGTTGAAGGAGCATTTTAAGAGACTCTCTGGCCATGAGTTACCTGTTAAGTCTGCACAGGTTACAGAGTCTACTGATTTTAATGAGCTAGTGGGGAAGGAACCGTGGCTTTCAACTTCCAAACTGGTTGTGAAACCTGACATGTTATTTGGAAAGCGTGGTAAAAGCGGTTTGGTTGCCTTGAATCTGGATTTGGCACAAGTTGCTTCTTTTGTGAAAGAGCGTCTTGGCAAAGAGGTTGAGATGAGTGCATGCAAAGGACCAATTACAACCTTCATTGTTGAACCTTTCATCCCACACAATGAAGAGTTCTACCTTAGCATCGTCTCAGAGAGACTTGGGAACAGTATAAACTTTTCAGAATGCGGAGGAATTGAAATTGAAGAGAACTGGGATAAGGTTAAGACAGTATTTGTTCCCACAGGTGTGTCTCTTACTTCTGAAACCATTGCTCCACTTGTTGCAACCCTTCCCTTGGAGTTCAGGAGAGAAATTGAGGAATTCCTCAAGGAGGTTTTTGCTCTATTTCAAGACCTGGATTTCACTTTCCTAGAAATGAACCCTTTCACATTGGTCAATGGAAAGCCTTATCCTTTGGATATGAGAGGTGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAAAAATGGGGAAACATTGAATTTCCAATGCCGTTTGGAAGGGTTATGAGTCCCACAGAGAGTTTCATTCATGGATTAGATGAAAAGACTAGTGCATCTTTGAAGTTTACAGTGTTGAACCCAGCAGGCCGAATTTGGACAATGGTAGCCGGGGGAGGCGCTAGTGTCATCTATGCTGACACGGTTGGAGATCTTGGATATGCTTCTGAGCTTGGAAACTACGCAGAATACAGTGGGGCACCAAAAGAAGAGGAGGTCTTGCAGTATGCCAGAGTTGTAATTGATTGTGCAACCGCAAAACCTGATGGCCACAAGAGAGCACTTGTGATTGGAGGAGGAATAGCAAACTTCACTGATGTTTCTGCGACATTTAGCGGCATAATTCGAGCACTTAAGGAGAAGGAGGAACAGCTAAAAGCGGCAAGGATGCACATATACGTGAGAAGAGGAGGTCCCAACTATCAGAAAGGTCTGGCGAAAATGCGGGCGCTCGGAGAAAACATCAGCATTCCTATTGAGGTTTATGGACCAGAAGAAACCATGACTGGTATATGCAAACAGGCGATCCAATGCATCACTGCAGCTGCTTAA 1272 0.4442 MARKKIREYDSKRLLKEHFKRLSGHELPVKSAQVTESTDFNELVGKEPWLSTSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGKEVEMSACKGPITTFIVEPFIPHNEEFYLSIVSERLGNSINFSECGGIEIEENWDKVKTVFVPTGVSLTSETIAPLVATLPLEFRREIEEFLKEVFALFQDLDFTFLEMNPFTLVNGKPYPLDMRGELDDTAAFKNFKKWGNIEFPMPFGRVMSPTESFIHGLDEKTSASLKFTVLNPAGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEEEVLQYARVVIDCATAKPDGHKRALVIGGGIANFTDVSATFSGIIRALKEKEEQLKAARMHIYVRRGGPNYQKGLAKMRALGENISIPIEVYGPEETMTGICKQAIQCITAAA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1018 423 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
Lele49g1018 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Lele49g1018 423 Gene3D - 1 233 - -
Lele49g1018 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Lele49g1018 423 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 390 IPR005809 GO:0006099
Lele49g1018 423 FunFam ATP-citrate synthase alpha chain protein 240 422 - -
Lele49g1018 423 Gene3D - 240 422 IPR016102 -
Lele49g1018 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 405 IPR016102 -
Lele49g1018 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1018 Lele-ChrLele49 6529242 6532540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1018 1 423 Acyl Lipid Metabolism Gene Families AT1G10670 86.288 0.0 769
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1018 49 6529242 6532540 Lele49g1018 49 6529242 6532540 ECH
Lele49g1018 49 6529242 6532540 Lele51g1038 51 6647569 6650964 hybridization
Lele49g1018 49 6529242 6532540 Lele52g1075 52 7223221 7225996 hybridization