Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0938 ATGTTTCGTTCCTCGTATAAATGTGGGAATTCGTTGGCGTAGAAGAGGAGGGAAGAAAGGCGACTCAAGGAGGAGGAGGAAGACACGCAGAACAAGAAAGAGTGGCTCCTCCGTGAAGAAGCTTATAGGACTATATTCCCTTTCCCCTTTTCCTCCTTCTCTTTAGGATATTGCAGATTTTGCACCTGGATGGAAGAGAAGGAGGGCAAGCGCAATGTCATGGCCCAACCTCCGGAATCGAAGGTTGTTGTCGGGTTGAGATTTTGGGAAGCGGCTGCGGCTTCGACGGTGATATTGGGTTTTGTGTTAGGTCTTCTTTCTGTTTACCTGACCATGCCTGATTCAGATTACAGCTTTCTTAAGCTCCCACGTAACCTCGAAGATCTTCAAGTTCTACGAGGCCACCTTGAGAACTACACAAGTGACTACACTGCACAGGTCTTGGTGGGTTACTGTGTGGTATATATTTTCATGCAGACATTCATGATTCCGGGGACTGTGTTCATGTCATTGCTCGCTGGAGCTCTCTTCGGTGTATTCAGAGGTGTTGCTTTGGTTGTGTTCAATGCCACAGCTGGAGCTTCATCTTGCTATTTCCTGTCAAAACTGATCGGGCGACCCCTTGTCTTCTCTCTTTGGCCAGACAGACTAAAGTTCTTTCAGGACCAGGTTGCTAAAAGAAGAAAGCGTTTGTTGAACTACATGCTCTTTCTGAGATTGACTCCAACCTTGCCTAACACATTTATCAATGTTGCCTCACCAATAGTGGATGTGCCTTATCACACTTTCTTTCTAGGAACTGTTATTGGACTCATACCTGCTGCTTATGTCACTGTCAAGGCTGGGCTAGCGCTTGGAGAGTTGCAATCGTTGAGAGATCTTTATGATTTCAACTCAATTGCTACAATATTTCTTATCGGAGTTGTTTCAGTTACACCTACACTAATCACCAAGTCGTAG 960 0.4552 MFRSSYKCGNSLAXKRREERRLKEEEEDTQNKKEWLLREEAYRTIFPFPFSSFSLGYCRFCTWMEEKEGKRNVMAQPPESKVVVGLRFWEAAAASTVILGFVLGLLSVYLTMPDSDYSFLKLPRNLEDLQVLRGHLENYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFRGVALVVFNATAGASSCYFLSKLIGRPLVFSLWPDRLKFFQDQVAKRRKRLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFLGTVIGLIPAAYVTVKAGLALGELQSLRDLYDFNSIATIFLIGVVSVTPTLITKS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0938 319 Coils Coil 12 13 - -
Lele52g0938 319 Coils Coil 15 39 - -
Lele52g0938 319 Pfam SNARE associated Golgi protein 163 282 IPR032816 -
Lele52g0938 319 PANTHER - 72 315 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0938 Lele-ChrLele52 6108349 6110917 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0938 52 6108349 6110917 Lele52g0938 52 6108349 6110917 ECH
Lele49g0907 49 5668665 5669553 Lele52g0938 52 6108349 6110917 hybridization
Lele50g0959 50 6069114 6071370 Lele52g0938 52 6108349 6110917 hybridization