Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0907 ATGATTCCGGGGACCGTGTTCATGTCATTGCTTGCTGGAGCTCTCTTCGGCGTATTAAGAGGTGTTGCATTGGTTGTGTTCAATGCCACGGCTGGAGCTTCATCGTGCTATTTCCTGTCAAAACTGATCGGGCGACCCCTTGTCTTCTCTCTTTGGCCAGACAGACTAAAGTTCTTTCAGGACCAGGTTGCTAAAAGAAGAAAGAGTTTGTTGAACTACATGCTCTTTCTGAGATTGACTTCAACCTTGCCTAACACATTTATCAATGTTGCCTCACCAATAGTGGATGTGCCTTATCACACGTTCATTCTAGGCACTGTTATTGGACTCATACCTGCTGCTTATGTCACTGTCAAGGCTGGGCTAGCACTTGGAGAGTTGCAATCGTTGAGAGATCTTTATGATTTTAACTCAATTGCTACAATATTTCTGATAGGAGTTGTTTCAGTTACACCTACACTAATCACCAGGACTGTACAGATATTCCTGAGGCGATCACAATGTGGCTCGCTGCTTATGGATTATGATTGCCAGAATGCTGCAGAAATTCAAGACAAAAGACGATCATGGAGGAGAAAATGTTAA 585 0.4342 MIPGTVFMSLLAGALFGVLRGVALVVFNATAGASSCYFLSKLIGRPLVFSLWPDRLKFFQDQVAKRRKSLLNYMLFLRLTSTLPNTFINVASPIVDVPYHTFILGTVIGLIPAAYVTVKAGLALGELQSLRDLYDFNSIATIFLIGVVSVTPTLITRTVQIFLRRSQCGSLLMDYDCQNAAEIQDKRRSWRRKC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0907 194 Pfam SNARE associated Golgi protein 2 121 IPR032816 -
Lele49g0907 194 PANTHER - 1 154 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0907 Lele-ChrLele49 5668665 5669553 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0907 49 5668665 5669553 Lele49g0907 49 5668665 5669553 ECH
Lele49g0907 49 5668665 5669553 Lele51g0923 51 5756676 5758618 hybridization
Lele49g0907 49 5668665 5669553 Lele52g0938 52 6108349 6110917 hybridization