Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0937 ATGGCGGAAAGGAGATTGCGCGTGGGATACGCCCTCGCATCTAAGAAGCAGAATAGCTTTATTAAGGACTCGTTGGTCACCCTCGCTAAATCTCGCGGCGTCGACCTCGTGCGGGTCGATACAGAGCGCTCGCTGTTGGATCAGGGTCCCTTCGATTGTGTCCTTCACAAATTGTACGGCGACGATTGGAAGAGGCAGTTGTGCGAGTTCAAGGCGGAATACCCTAATGCGCTGATTCTCGACTCCCCTGAGTTGATTGAGAGGCTCCATAACCGGATTTCCATGCTGCAGGTGGTGTCCGAGTTGACAATTGAGGACCGCGACGAGACCTTTGGGATTCCTAAACAGATTGTCATATACGACAGTGAAACGCTGTTTGATCGGCAGACGTGGGAGACTTTGAAGTTTCCGGTGATTGCGAAGCCTTTGGTGGCGGACGGAAGCGCCAAGTCTCACAAAATGGCGCTTGTTTATAACCATGATAGCTTGAACAAGCTGAAGCCACCGATTGTGTTGCAGGAGTTTGTGAACCATGGAGGAGTCATTTTTAAGGTGTATGTGGTGGGACAGTACGTTAAATGCGTCAAGAGGAAGTCTTTGCCGGATGTTTCCGAGGATAAGTTGGCGGTTTCAGGGGACTTGTTGTCTTTCTCTCAGGTCTCGAATTTGGCCACGAATGAGAGGATTGATGATATGTATTACAAGCTGATGCGGTTGGACAACACAGCGATGCCCCCGCTGAACTTCATTACCGAGATAGCTCGAGGTTTGAGGCACGCGTTGAAGTTGAACCTTTTTAACTTCGATGTGATTCGGGACTCTAGAAATGAGAATCGGTATCTCATCATCGACATTAACTACTTCCCTGGGTATGCCAAGATGCCCGGTTACGAGACTGTGTTGACAGACTTTTTCTGTGATACAATGTACATGAAACAGAAGGAAGAGGTAGAGAGTCCGGATGAGATTGACAGCTCAGTGAATACTGGTATGGATAGTTGTCAGGTGATGAGAAAAATATTAAGCAATACTTGTGGTGATGGGGATGACAGCAGCCTTCAAGTTTCAGCTCTTAGCAGGGAGGAGAATGAGACTTCTCTTCAAGTCTGA 1110 0.482 MAERRLRVGYALASKKQNSFIKDSLVTLAKSRGVDLVRVDTERSLLDQGPFDCVLHKLYGDDWKRQLCEFKAEYPNALILDSPELIERLHNRISMLQVVSELTIEDRDETFGIPKQIVIYDSETLFDRQTWETLKFPVIAKPLVADGSAKSHKMALVYNHDSLNKLKPPIVLQEFVNHGGVIFKVYVVGQYVKCVKRKSLPDVSEDKLAVSGDLLSFSQVSNLATNERIDDMYYKLMRLDNTAMPPLNFITEIARGLRHALKLNLFNFDVIRDSRNENRYLIIDINYFPGYAKMPGYETVLTDFFCDTMYMKQKEEVESPDEIDSSVNTGMDSCQVMRKILSNTCGDGDDSSLQVSALSREENETSLQV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0937 369 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 7 86 IPR041429 -
Lele52g0937 369 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 107 306 IPR040464 -
Lele52g0937 369 Gene3D - 84 290 - -
Lele52g0937 369 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 314 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lele52g0937 369 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 81 292 - -
Lele52g0937 369 PIRSF ITPK 1 320 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lele52g0937 369 FunFam Inositol-tetrakisphosphate 1-kinase 82 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0937 Lele-ChrLele52 6097347 6098456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0937 52 6097347 6098456 Lele52g0937 52 6097347 6098456 ECH
Lele49g0906 49 5661452 5662561 Lele52g0937 52 6097347 6098456 hybridization
Lele50g0958 50 6052379 6053488 Lele52g0937 52 6097347 6098456 hybridization