Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0906 ATGGCGGAAAGGAGATTGCGCGTGGGGTACGCCCTCGCATCTAAGAAGCAGAATAGCTTTATTCAGGACTCGTTGGTCACCCTCACTAAATCTCGCGGCGTCGACCTCGTGCGGGTCGATACAGAGCGCTCGCTGTTGGATCAGGGTCCCTTCGATTGTGTACTTCACAAATTGTACGGCGACGATTGGAAGGGGCAGTTGCGCGAGTTCAAGGCGAAATACCCCAATGCACTGATTCTTGACTCGCCTGAGGCGATTGAGAGGCTCCATAACCGGATTTCCATGCTGCAGGTGGTGTCCGAGTTGACAATTGAGGACCTGGACGAGACCTTCGGGATTCCTAAGCAGATTCTCATATACGACAGTGAAACGCTGTTTGATCGGCAGGCTTGGGAGACTTTGAAGTTTCCGGTGATTGCGAAGCCTTTGGTGGCGGACGGGAGCGCCAAGTCGCACAAAATGGCGCTTGTTTATAACCATGATAGCTTGAACAAGCTGAAGCCCCCGATAGTGTTGCAGGAGTTTGTGAACCATGGAGGAGTCATTTTTAAGGTGTATGTGGTGGGACAGTACGTTAAATGCGTCAAGAGGAAGTCTTTGCCGGATGTTTCAGAGGATAAATTGGCGGTTTCAGGGGACCTGTTGTCTTTCTCTCAGGTCTCGAATTTGGCCACGAATGAGAGGATTGATGATATGTATTACAAGCTGATGCGGTTGGACAACACAGCGATGCCCCCGCTGAACTTCATTACCGAGATAGCTCGAGGTTTGAGGCACGCATTGAAGTTGAACCTTTTTAACTTCGATGTGATTCGGGACTCTAGAAATGAGAATCGGTATCTCATCATCGACATTAACTACTTCCCCGGGTATGCCAAGATGCCCGGTTACGAGACTGTGTTGACAGACTTTTTCTGTGATATAATGTACATGAAACAGAAGGAAGAGGTAGAGACTCCGGATGAGATTGACAGCTCAGTGAATACTGGTATGGATAGTTGTCAGGTGATGAGAAAAATATTAAGCAATACTTGTGGTGATGGGGATGACTGCAGCCTTCAAGTTTCAGCTCTTAGCAGGGAGGAGAATGAGACTTCTCTTCAAGTCTGA 1110 0.4856 MAERRLRVGYALASKKQNSFIQDSLVTLTKSRGVDLVRVDTERSLLDQGPFDCVLHKLYGDDWKGQLREFKAKYPNALILDSPEAIERLHNRISMLQVVSELTIEDLDETFGIPKQILIYDSETLFDRQAWETLKFPVIAKPLVADGSAKSHKMALVYNHDSLNKLKPPIVLQEFVNHGGVIFKVYVVGQYVKCVKRKSLPDVSEDKLAVSGDLLSFSQVSNLATNERIDDMYYKLMRLDNTAMPPLNFITEIARGLRHALKLNLFNFDVIRDSRNENRYLIIDINYFPGYAKMPGYETVLTDFFCDIMYMKQKEEVETPDEIDSSVNTGMDSCQVMRKILSNTCGDGDDCSLQVSALSREENETSLQV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0906 369 Gene3D - 84 290 - -
Lele49g0906 369 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 7 86 IPR041429 -
Lele49g0906 369 FunFam Inositol-tetrakisphosphate 1-kinase 82 290 - -
Lele49g0906 369 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 314 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lele49g0906 369 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 81 292 - -
Lele49g0906 369 PIRSF ITPK 1 321 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lele49g0906 369 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 306 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0906 Lele-ChrLele49 5661452 5662561 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0906 49 5661452 5662561 Lele49g0906 49 5661452 5662561 ECH
Lele49g0906 49 5661452 5662561 Lele51g0922 51 5749321 5750430 hybridization
Lele49g0906 49 5661452 5662561 Lele52g0937 52 6097347 6098456 hybridization