Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0919 ATGGAAACAAATATTGCAAAGGCATTGGATAGAGAACTGCTTAATTTGAAACGAAAGCGGGCTACTCAATGTGCTGCAAAATTTAATGGAGCTTCCCGCACAGTGCTACCTCATTGGTCATCCTTGTCATTGCCAACAAACAATTATGTCAAGCGGAGGAGATTGGGTGAACATAAAAGCAAGTATACCGATTATGGTTCTGATTTCAGACGATCTTTACTTAGATGTTATTTGAACTTCAAAAAAAGTGGGAGGCCAGAACGGTTAATGTTCTATCAGAACGGTGAATGGACAAACTTCCCTGTGGATGTTGTCAACTTGGTTAAAAAAGAACTAGAGGTAAAGAAGGCTTCTGTGGAAGTAGAGTTCAATGGCTGTCATCGTGTGCTAGATTTTCTGCACATGTATCAGATGGACTTGAAAATGGGTTCACAGCAACCTATTGCATGGATTGATGAGAAGGGTCACTGTTTCTTTCCTGAAGTTTGTGCTGCTTCTGATGAAAGAGTTCATGAACATCTGTGTGAGGAGCCTTTTGAACCTAATGAGATAAAATTGAATTTGGAAATTGAAATAAATGGAGTGGATGAATCCAAGTTGAGGGAATGTAGTGATGAGTCAAATGTGGTATTAAATCATGTCCAAATTGATGCAAAGCACCCCTGCAATCAGTATGTGGTGGAAGTTGGAGATGGTAGTAATGAGCTGGATATTGGAAATTTTGACGAAGCTATTGAACAAAATCAAGAGATAGGTTTAGATGCACATACTGAATCTGTAAATGGAAAATTGGATTTGAATACTGTACAGAATTTATTTCTTAAGAACATGAATAGTTATGGCACCACGGACATAGTGGAGATATACCGCTACTCAAGCACTTTGATGCAATCACGATTGGAGCTATTCCAGAAGCAGGCTGAAATTACAAAGAAGTGTCGTGCAGATGCTAATATTCGATGCGGTTGGCTTGCTTCTTCAAAAGGAGAACTGTCAACAATCATGAAGTATGGGCTTGGGCATTGTGGTCTATCTGCAACTAAATCTACATATGGTGCTGGGGTTCATCTTGCAGCTGTTGACTGCCCTAACATGAGTGCAATTAATTGTGATGTTGATGAAAATGGGGTACGACACATGGTGTTTTGTCGTGTAATAATGGGGAACATGGAGCTTCTCCGTCCAGGCACTAGGCAATTTCATCCCAGTAGTAATGACTATGATAATGGGGTAGATGACATTCAAAGTCCGAGATACTATGTAGTATGGAATATGAATTTGAGTACTCACATCTATCCAGAATTCGTTGTTAGTTTCAAGGTTTCTTCTGATGCTGAAGGGGATCATTTTGGTATTGAGAGTGAACATAATGTTTCTGGAATTACTACACCCTGTCAAGGTCCAGGCCTGTTACAATCTGAGTCTTCTACCATAGATATAAGTATTAGCCAACCGAATTTAGACTGCGGGATTCCTCAAGGGAAAGCTGCTAGTATGAACTCTACCTCTTCAAGAGGTCCAAAATCCCCTTGGATGCCTTTTCCTATGCTTTTTGCTGCTATATCAAACAAGGTTCCTCCCATGGACATGGAGCTTATCAATACTCATTATGAACAATTCAGGGCAAAGAAGATAGCCCGTGATGATTTTGTGAAGAAGTTGAGATTGATAGTTGGAGATAGTCTCTTGAGAACTACGATAACAAAGCTTCAGTCAGTGCAAGATGCCATCTGA 1734 0.4002 METNIAKALDRELLNLKRKRATQCAAKFNGASRTVLPHWSSLSLPTNNYVKRRRLGEHKSKYTDYGSDFRRSLLRCYLNFKKSGRPERLMFYQNGEWTNFPVDVVNLVKKELEVKKASVEVEFNGCHRVLDFLHMYQMDLKMGSQQPIAWIDEKGHCFFPEVCAASDERVHEHLCEEPFEPNEIKLNLEIEINGVDESKLRECSDESNVVLNHVQIDAKHPCNQYVVEVGDGSNELDIGNFDEAIEQNQEIGLDAHTESVNGKLDLNTVQNLFLKNMNSYGTTDIVEIYRYSSTLMQSRLELFQKQAEITKKCRADANIRCGWLASSKGELSTIMKYGLGHCGLSATKSTYGAGVHLAAVDCPNMSAINCDVDENGVRHMVFCRVIMGNMELLRPGTRQFHPSSNDYDNGVDDIQSPRYYVVWNMNLSTHIYPEFVVSFKVSSDAEGDHFGIESEHNVSGITTPCQGPGLLQSESSTIDISISQPNLDCGIPQGKAASMNSTSSRGPKSPWMPFPMLFAAISNKVPPMDMELINTHYEQFRAKKIARDDFVKKLRLIVGDSLLRTTITKLQSVQDAI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0919 577 Gene3D - 259 444 - -
Lele52g0919 577 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 60 572 IPR044964 -
Lele52g0919 577 SUPERFAMILY ADP-ribosylation 266 440 - -
Lele52g0919 577 ProSiteProfiles PARP catalytic domain profile. 243 460 IPR012317 GO:0003950
Lele52g0919 577 Pfam RCD1-SRO-TAF4 (RST) plant domain 507 571 IPR022003 -
Lele52g0919 577 ProSiteProfiles RST domain profile. 505 576 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0919 Lele-ChrLele52 5949518 5953951 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0919 52 5949518 5953951 Lele52g0919 52 5949518 5953951 ECH
Lele49g0893 49 5536298 5540519 Lele52g0919 52 5949518 5953951 hybridization
Lele50g0937 50 5907010 5911456 Lele52g0919 52 5949518 5953951 hybridization