Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0893 ATGGAAACAAATATTGCAAAGGCATTGGATAGAGAAGTGCTTAATTTGAAACGAAAGCAATCTACTCAATGTGCTGCAAAATTAAATGGAGCTTCCCACACTCTGCTACCTCATTGGTCATCCTTAACATTGCCAACAAACAATTATGTCAAGCGGAGGAGATTGGGTGAACATACAAGCAAGTATACCGATTATGGGTCTGATTTCAGACAATCTTTACTTAGATGTTATTTGAACTTCAAAAAAAGTGGGAGGCCAGAGCAGTTAATGTTCTATCAGAGCGGTGAATGGACAAACTTCCCTGAGGATGTTGTCAATTTGGTTAGAAAAGAACTAGAGGTAAAGAAGGCTTCTGTGGAAGTAGAGTTCAATGGCTGTCGTTGTGTGCTAGATTTTCTGCACATGTATCAGATGGACTTGAAAACTGGTTCACGGCAACCTATTGCATGGATTGATGAGAAGGGGCACTGCTTCTTTCCTGAAGTTTGTGCTGCTTCCGATGAAAGAGTTCATGAACATCTGTGTGAGGAGCCTTTTGAACCTCATGAGATAAAATTGCATTTGGAAATTGAAATAAATGGAGTGGATGAATCCAAGTTGAGGGAATGTAGTGGTGAGTCAAATGCGGTATTAAATCACGTCCAAATTGATGCAAAGCACCCCTGCAATGAGTATGCCTTAGAAGTTGAAGATGGTAGTAATGAGCTGGATATTGGAAATTTTGGCGAAGCTATTGAACAAAATCAAGAGATAGGTTTAGATGCACATATTGAATCTGTAAATGGAAAATTGGATTTGGATACTGTACAGAATTTATTTCTTAAGGGCATGAATAGTTATGGCGCCACTGACATAGTGGAGATATACCGCTGCTCAAGCACTTTGATGCAATCACGATTGGAGCTATTCCAGAAGCAGGCTGAAATTACAAAGAAGTGTCGTGCAGATGCTAATATTCAATGCGGTTGGCTTGCTTCTTCAAAAGGAGAACTGTCAACAATCATGAAGTATGGGCTTGGGCACTGTGGCCTATCTGCAACTAAATCCACATATGGTGCTGGTGTTCATCTTGCAGCTGTTGACTGCCCTAACATGAGTGCAATTAATTGTGATGTTGACGAAAATGGGGTACGACACGTGGTGTTTTGTCATGTAATAATGGGGAACATGGAGCTTCTACGTCCGGGCACTAGGCAATTTCATCCCAGTAGTAATGACTATGATAGTGGGGTAGATGACATTCAAAGTCCAAGATACTATGTAGTATGGAATATGAATTTGAATACTCACATCTATCCAGAATTCGTTGTTAGTTTCAAGGTTTCTTCTGATACTGAAGGGGATCATTTTGGTATTGAGAGTAAACATAATGTTTCTGGAATTACTACACCCTGTCCATGTCCAGGCCTGTTACAATCTGAGTATTCTACTGTAGATATTAGCATTAGCCAACCGGCTTTAGACCGTGGGGTTCCTCAAGGGAAAGCTGCTAGTATGAACTCTACCTCTTCAGGAGGTCCAAAATCCCCTTGGATGCCTTTTCCTATGCTTTTTGCTGCTATATCAAACAAGGTTCCTCCCATGGACATGGAGCTTATCAATACTCATTATGAACAATTCAGGGCAAAGAAGATAGCACGTGATGATTTTGTGAAGAAGTTGAGATTGATAGTTGGAGATACTCTCTTGAGAACTACAATAACAAAACTTCAGTGCAAGATGCCATCTGAAACGGGCAAAGGTCAAGCAGCTACAGAAAGGCTGAGGCTGCCTTGA 1776 0.4082 METNIAKALDREVLNLKRKQSTQCAAKLNGASHTLLPHWSSLTLPTNNYVKRRRLGEHTSKYTDYGSDFRQSLLRCYLNFKKSGRPEQLMFYQSGEWTNFPEDVVNLVRKELEVKKASVEVEFNGCRCVLDFLHMYQMDLKTGSRQPIAWIDEKGHCFFPEVCAASDERVHEHLCEEPFEPHEIKLHLEIEINGVDESKLRECSGESNAVLNHVQIDAKHPCNEYALEVEDGSNELDIGNFGEAIEQNQEIGLDAHIESVNGKLDLDTVQNLFLKGMNSYGATDIVEIYRCSSTLMQSRLELFQKQAEITKKCRADANIQCGWLASSKGELSTIMKYGLGHCGLSATKSTYGAGVHLAAVDCPNMSAINCDVDENGVRHVVFCHVIMGNMELLRPGTRQFHPSSNDYDSGVDDIQSPRYYVVWNMNLNTHIYPEFVVSFKVSSDTEGDHFGIESKHNVSGITTPCPCPGLLQSEYSTVDISISQPALDRGVPQGKAASMNSTSSGGPKSPWMPFPMLFAAISNKVPPMDMELINTHYEQFRAKKIARDDFVKKLRLIVGDTLLRTTITKLQCKMPSETGKGQAATERLRLP 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0893 591 Pfam RCD1-SRO-TAF4 (RST) plant domain 507 571 IPR022003 -
Lele49g0893 591 SUPERFAMILY ADP-ribosylation 267 441 - -
Lele49g0893 591 ProSiteProfiles PARP catalytic domain profile. 243 460 IPR012317 GO:0003950
Lele49g0893 591 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 60 573 IPR044964 -
Lele49g0893 591 Gene3D - 260 444 - -
Lele49g0893 591 Pfam WWE domain 94 148 IPR004170 -
Lele49g0893 591 ProSiteProfiles RST domain profile. 505 576 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0893 Lele-ChrLele49 5536298 5540519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0893 49 5536298 5540519 Lele49g0893 49 5536298 5540519 ECH
Lele49g0893 49 5536298 5540519 Lele51g0909 51 5611657 5616313 hybridization
Lele49g0893 49 5536298 5540519 Lele52g0919 52 5949518 5953951 hybridization