Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0886 ATGGCGAAAAGCAAGGTCTTGATTGTGGGAGGAACTGGGTATATCGGGAGAAGACTAGTGAAGGCGTGTCTTGCTCAGGGCCATGAGACCTATATCGTTCAAAGACCTGAGTTAGGTCTTCAAATTGAAAAGCTTCAGATGTTGCTCTCCTTCAAGAAGCAGGGTGCTCATCTCGTTCAGGCCTCCTTCTCCGATCACCGGAGCCTCGTTGACGCCGTCAACCAGGTTGACGTTGTCATCAGCGCCGTCTCCGGCGTCCATTTCCGCAGTCACAGCATTCTGTTGCAGCTCAAGCTCGTTGACGCCATCAAAGAAGCTGGAAATGTTAAGCGATTCTTGCCTTCGGAATTTGGATTGGACCCTGCTCGCATGGGACATGCTCTGGAACCAGGAAGAGTGACATTTGATGACAAAATGACCGTGAGAAAAGCAATAGAGGAAGCTAACATCCCTTACACTTACATCTCCGCAAATTTGTTCGCCGGATACTTCGCCGGCAGCCTCTCTCAGATGGGCTCCTTTGTCCCTCCAAGAGACAAGGTTCATCTTTTTGGTGATGGCAACCTCAAAGCTGTGTTTATGGATGAGGATGATGTTGCAACATATACTATAAAAGCAATAGACGATCCTCGAACTCTAAACAAAACATTGTATTTAAGGCCATCAGAGAACATACTTTCCCAAAGAGAGCTTATTGGAATTTGGGAGGAACTCATTGCAAAGGAACTAGACAAGACTTACATATCTGCACAAGACTTCCTCACCACCTTGAAAGGCATGGATTATAAACTCCAAGTTGGAATTGGACACTTCTATCATATTTTCTATGAGGGATGTTTAACAGATTTTGAAATAGGCGACGAAGGAGAAGAGGCCTCAAAGCTTTATCCTGAGGTTAATTACACACGCATGGATGAATACTTAAGGATCTATGTGTAA 939 0.4526 MAKSKVLIVGGTGYIGRRLVKACLAQGHETYIVQRPELGLQIEKLQMLLSFKKQGAHLVQASFSDHRSLVDAVNQVDVVISAVSGVHFRSHSILLQLKLVDAIKEAGNVKRFLPSEFGLDPARMGHALEPGRVTFDDKMTVRKAIEEANIPYTYISANLFAGYFAGSLSQMGSFVPPRDKVHLFGDGNLKAVFMDEDDVATYTIKAIDDPRTLNKTLYLRPSENILSQRELIGIWEELIAKELDKTYISAQDFLTTLKGMDYKLQVGIGHFYHIFYEGCLTDFEIGDEGEEASKLYPEVNYTRMDEYLRIYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0886 312 Gene3D - 158 308 - -
Lele52g0886 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 262 IPR036291 -
Lele52g0886 312 Pfam NmrA-like family 6 260 IPR008030 -
Lele52g0886 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Lele52g0886 312 PANTHER PINORESINOL REDUCTASE-RELATED 1 311 - -
Lele52g0886 312 Gene3D - 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0886 Lele-ChrLele52 5755600 5757192 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0886 52 5755600 5757192 Lele52g0886 52 5755600 5757192 ECH
Lele49g0872 49 5388323 5389329 Lele52g0886 52 5755600 5757192 hybridization
Lele50g0905 50 5716244 5717912 Lele52g0886 52 5755600 5757192 hybridization