Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0872 ATGGGACATGCTCTGGAACCAGGAAGAGTGACATTTGATGACAAAATGACATTGAGAAAAGCAATAGAGGAAGCTAACATCCCTTACACTTACATCTCTGCTAACCTGTTCGCCGGATACTTCGCCGGCAGCCTCTCTCAGATGGGCTCCTTTTTCCCTCCAAGAGACAAGGTTCATCTATTTGGTGATGGCAACCTCAAAGCTGTGTTCATGGATGTGGATGATGTGACAACATATACCATAAAAGCAATAGACGACCCACGAACTCTAAACAAAACATTGTATTTAAGGCCAGAAGAGAACATTCTTTCCCAAAGAGAGCTTATTGGAATTTGGGAGAAACTCATTGGAAAGGAACTACACAAGACTTACATCTCTGCACAAAACTTCCTCACCACCTTGAAAGGCATGAATTATAACCTCCAAGTTGGAATTGGACACTTCTACCATATTTTCTATGAGGGTTGTTTAACAGATTTTGAAATAGGTGAAGAAGGAGAAGAAGCCTCTGCTTTATCCTGA 522 0.4157 MGHALEPGRVTFDDKMTLRKAIEEANIPYTYISANLFAGYFAGSLSQMGSFFPPRDKVHLFGDGNLKAVFMDVDDVTTYTIKAIDDPRTLNKTLYLRPEENILSQRELIGIWEKLIGKELHKTYISAQNFLTTLKGMNYNLQVGIGHFYHIFYEGCLTDFEIGEEGEEASALS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0872 173 Pfam NmrA-like family 5 119 IPR008030 -
Lele49g0872 173 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 139 IPR036291 -
Lele49g0872 173 Gene3D - 2 172 - -
Lele49g0872 173 PANTHER PINORESINOL REDUCTASE-RELATED 3 172 - -
Lele49g0872 173 Gene3D - 35 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0872 Lele-ChrLele49 5388323 5389329 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0872 49 5388323 5389329 Lele49g0872 49 5388323 5389329 ECH
Lele49g0872 49 5388323 5389329 Lele51g0889 51 5467437 5467898 hybridization
Lele49g0872 49 5388323 5389329 Lele52g0886 52 5755600 5757192 hybridization