Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0885 ATGGAAAAGAGCAGAGTTCTGATTGTTGGGGGAACTGGGTACTTAGGGAAGAGGTTGGTGAAGGCAAGCTTAGAAGAGGGACATGAAACCTACGTTCTTCATAGACCAGAGATAGGAATGGACATTGAGAAGGTTCAGCTTCTTCTGTCATTTAAGGAACAAGGAGTTCACCTTATTTCAGGCTCCTTCAATGACCACCAGAGCCTCGTGAATGCTGTGAAGCTCATCGATGTTGTCATTTGCGCCATATCCGGCGTCCATATTCGCAGTCACCACATCCTACTTCAACTCAAGCTCATCGATGCCATTAAAGAAGCCGGAAATATCAAGAGGTTTTTGCCATCTGAGTTTGGGACGGATCCTGCAAGAATGGAACATGCATTGGAGCCTGGAAGAGTAACATTTGATGACAAAATGGTAGTGAGGAAAGCCATTGAAGAGGCCAACATACCCTTTACCTATGTTTCTGCTAACTGTTGTGCTGGTTATTTCCTCGGTGGTCTGTGTCAACCTGGTTTCATACTACCCTCCAAGGATTCTGTGGTCTTGCTTGGAGATGGCAACACAAAGGCAATTTATGTGGATGAGGATGATATAGCAAGGTACACTATCAAAAGCATAGATGACCCCAGGACTCTAAACAAGACAGTTTACATAAGGCCACCCAAGAACATCTTGTCCCAAAGAGAAGTTGTCCAAATCTGGGAGAAGCTCATTGGGAAAGAGTTGAACAAGTCTTCAATTTCTGAACAACAGTTCCTGGCTTCCTTAGAAGGACAATCATACGTAGATCAGGTGGGACTGATACATTATTACCATGTTTGCTTTGAAGGATGTCTTGCAAATTTCGAGATAGGCGAAGAAGGAGTTGAAGCATGCCAACTTTACCCTGAAATTAACTACACAACGGTGGAACAATATATGAAACGCTATGCATAG 939 0.4366 MEKSRVLIVGGTGYLGKRLVKASLEEGHETYVLHRPEIGMDIEKVQLLLSFKEQGVHLISGSFNDHQSLVNAVKLIDVVICAISGVHIRSHHILLQLKLIDAIKEAGNIKRFLPSEFGTDPARMEHALEPGRVTFDDKMVVRKAIEEANIPFTYVSANCCAGYFLGGLCQPGFILPSKDSVVLLGDGNTKAIYVDEDDIARYTIKSIDDPRTLNKTVYIRPPKNILSQREVVQIWEKLIGKELNKSSISEQQFLASLEGQSYVDQVGLIHYYHVCFEGCLANFEIGEEGVEACQLYPEINYTTVEQYMKRYA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0885 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Lele52g0885 312 Pfam NmrA-like family 6 242 IPR008030 -
Lele52g0885 312 Gene3D - 4 297 - -
Lele52g0885 312 Gene3D - 158 308 - -
Lele52g0885 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 266 IPR036291 -
Lele52g0885 312 PANTHER PINORESINOL REDUCTASE-RELATED 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0885 Lele-ChrLele52 5750422 5752346 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0885 52 5750422 5752346 Lele52g0885 52 5750422 5752346 ECH
Lele49g0871 49 5382196 5388058 Lele52g0885 52 5750422 5752346 hybridization
Lele50g0904 50 5710216 5712082 Lele52g0885 52 5750422 5752346 hybridization