Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0871 ATGACTGCGGAAATGAACACCGGAGACGGCGCTGATGACAACGTCAACCTGCTTGGCGGCATCAACAAGGCTCCGGTGACCGGAAAAGGAGGCCTGAACAAGATGAGAACCCCGCTTCTGGAAGCAACATCTGAAGCCTCTCAATTTGAAGACCTAACTCAGGTCGTTGAACGATATAGGTCTCATGGCCCTGAGCAAGACAAGCCTTCACTATCCTCCTCCCAATATACCCAGTTCCTCCCACAATCAAAAACCTTGCTTTTCGCCATTTTTGGTCACATATTGAAGGAGTTGTTGGGTATAGGAAGAATATTGAATATTTGCAGATCAAAAGCAGCCAACTCGCAAATAGTGCACTTTTTCCAACCTATGTGTACACTCCAAGACACCAAGATCAAGCTCAGGTTTTCTGTGTGTGTGTATATATGTGTGTGTGTGTCAAGAAGAACACATCCCCACCAAAATAGCACAGAGAGAGAGATGGAAAATAGCAGAGTTCTGATCGTTGGGGGAACTGGGTACTTAGGGAAGAGGTTGGTGAAGGCAAGCTTAGAAGAGGGACATGAAACCTACGTTCTTCACAGACCAGAGATAGGAGTGGACATTGAGAAGGTTCAGCTTCTTCTGTCATTTAAGGAACAAGGAGCTCACCTCATTTCAGGCTCCTTCAATGACCACCAGAGCCTCGTGAATGCTGTGAAGCTTGTCGATGTTGTCATTTGCGCCATATCCGGTGTCCATATTCGCAGTCACCACATCCTACTTCAACTCAAGCTAGTCGATGCCATTAAGGAAGCCGGAAATATCAAGAGGTTTTTGCCATCTGAGTTTGGTACGGATCCCTCAAGAATGGCACATGCATTGGAGCCAGGAAGAGTAACATTTGATGACAAAATGGTAGTGAGGAAAGCCATTGAAGAGGCCAACATACCCTTTACCTATGTTTCTGCTAACTGTTTTGCTGGTTATTTCCTCGGTGGTCTGTGTCAGCCTGGTTTCATTCTACCCTCCAAGGATTCTGTTGTCTTGTTTGGAGATGGCAACACAAAGGCAATTTATGTGGATGAGGATGATATAGCGAGGTACACTATCAAAACCATAGATGACCCCAGGACGCTAAACAAGACAGTTTACATAAGGCCACCCAAGAACATCTTGTCCCAAAGAGAAGTTGTCCAAATCTGGGAGAAACTCATTGGGAAAGAGTTGAACAAGTCTTCAATTTCTGAACAACAGTTCCTGGCTTCCTTAGAAGGAAAAACATATGTAGAGCAGGTGGGACTGATACATTACTACCATGTTTGCTTTGAAGGATGTCTTGCAAATTTCGAGATAGGAGAAGAAGGAGTTGAAGCATGCCAACTTTACCCTGAAATTAACTACACTACGGTTGAACAATATATGAAACGCTATGCATAG 1419 0.4461 MTAEMNTGDGADDNVNLLGGINKAPVTGKGGLNKMRTPLLEATSEASQFEDLTQVVERYRSHGPEQDKPSLSSSQYTQFLPQSKTLLFAIFGHILKELLGIGRILNICRSKAANSQIVHFFQPMCTLQDTKIKLRFSVCVYICVCVSRRTHPHQNSTEREMENSRVLIVGGTGYLGKRLVKASLEEGHETYVLHRPEIGVDIEKVQLLLSFKEQGAHLISGSFNDHQSLVNAVKLVDVVICAISGVHIRSHHILLQLKLVDAIKEAGNIKRFLPSEFGTDPSRMAHALEPGRVTFDDKMVVRKAIEEANIPFTYVSANCFAGYFLGGLCQPGFILPSKDSVVLFGDGNTKAIYVDEDDIARYTIKTIDDPRTLNKTVYIRPPKNILSQREVVQIWEKLIGKELNKSSISEQQFLASLEGKTYVEQVGLIHYYHVCFEGCLANFEIGEEGVEACQLYPEINYTTVEQYMKRYA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0871 472 Gene3D - 318 468 - -
Lele49g0871 472 Pfam NmrA-like family 166 402 IPR008030 -
Lele49g0871 472 Gene3D - 164 457 - -
Lele49g0871 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 426 IPR036291 -
Lele49g0871 472 PANTHER PINORESINOL REDUCTASE-RELATED 161 471 - -
Lele49g0871 472 CDD PCBER_SDR_a 165 467 IPR045312 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0871 Lele-ChrLele49 5382196 5388058 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0871 49 5382196 5388058 Lele49g0871 49 5382196 5388058 ECH
Lele49g0871 49 5382196 5388058 Lele51g0888 51 5463388 5465321 hybridization
Lele49g0871 49 5382196 5388058 Lele52g0885 52 5750422 5752346 hybridization