Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0870 ATGGAAGAAAGGGGGTTTTCTGGGTTATATAAGAACACAAGTGAAGAGTTGTTTCTGAAGACAGTGATGGAAAGTCCAATTGGAATGCCAGCACCAACCATGGAGATGTTAGGTTTCAAGGCTGTTTCTCAAAGTTTTCGCACAGATAGTGAAGAGCTCTTCAAACGCTGGCTAACAAATGGAGAGGGTGGTTACAATTCAACAAGCGTAGGACATAACAGTCGATTATCACAGAGGATATCCACTGAACTAGCCAATTTGTCTAATCCACAACATGTTGGTGTAATTTCAGAGGAAAAAAGCAATGAAAAATTATATACAAGAAATAACCTTATGGTCAATGATACTCTTGGTGATTTTAGTGAACCTCCTATGATCAGAGATGCTGCTGATAGAGAACTGCAAGCTGGTAACTTGTTTCTGGCAAAGGCTTGGTTTCTTAGTGATCAACGAATGACAAGAAGCCGGTCCTCGGAGTTGAGGAGAAGGTATGTTGAAATGCAAAATGCTAAAGCAACTCAAGGTATGGAAACCATACACCTGGTCCCTCAGGATGGTGGTGCTGAAACATTGAAACAAGAAGGTTTGAATGTAAACGGTTTCGGTTACCTCTCTCGGTGCGAGCTTCCCAACCAGAAGGCGGCTACATTCATGTCTCCATCAAACTCATCTTCATCTACCTTCAATACACCACAACAAATGGGAGATGCAGATAAAGTTTCATCTTGTGTGAACATGCTAAAAGGTTCATTAGAACGTAAGAGACTCAGCAACCATATAGAGAAAGAATCTGCAGAAGATAGCTCCAATAATGATATATTTGGTGCTCATCAAGGTGATTTTGCCAAAACTATTTATATGGAAGGACAAGAAAACTGGATTTATCAGAATACAATGAATTTTCAAGGAGCATCTAATAATAATGGTCAAGTTAAGGACCATGGAGTTCCACAACAAACACTTGAAGGATCTATGAAGCTTGACATGGATGGTTTCGGGAATCAGACAAACCCGATATACATTGGAACAGCTTCGCGAGAACCGTCTCAAAGCGAATCTTCTGCTGCTGCACCAGTAGTTTCCTCTGGTTTAGATGCAATTGAAGGTCCAAGCATCTCAAGTCAAACGCCATGTGAAAACTCAAGGAAACAAGTGGGAGTGAGTAAAGGTTCAGAAAATAGAGTCAAAGGTTTCAGAGAACAGATAATGGATAATTTGAAAGATGATCGGAAGAGGAGAAGTCTAGAAAGATATGGATCTGTAACATCATCAGCTGTATCAGAGGACAAGGGGGATGCCACAAAAAAGCGGCGAGTGGAGCGATCAAGGAAAATGGCTGAGGCGAAGGAAAGGAATTCGACGCCGCCAGTTCCATCTGATATGCAAGCTGTGTTGAAGCGATGTGAGACCCTTGAGAAGGAAGTTAGATCCCTAAAACTTAATTTGTCCTTCATGAACAGGAAGGATTCAGAGCAAACAAAGCAGATAGAGGAACTTCAGAAGCAAAACGAAGATTTAGCAGACGAAAAGGAGCGCCTTTTAGAGGAAATTGAAAGGATTGTATCTGAAACTGGCAAGATTTAA 1584 0.4116 MEERGFSGLYKNTSEELFLKTVMESPIGMPAPTMEMLGFKAVSQSFRTDSEELFKRWLTNGEGGYNSTSVGHNSRLSQRISTELANLSNPQHVGVISEEKSNEKLYTRNNLMVNDTLGDFSEPPMIRDAADRELQAGNLFLAKAWFLSDQRMTRSRSSELRRRYVEMQNAKATQGMETIHLVPQDGGAETLKQEGLNVNGFGYLSRCELPNQKAATFMSPSNSSSSTFNTPQQMGDADKVSSCVNMLKGSLERKRLSNHIEKESAEDSSNNDIFGAHQGDFAKTIYMEGQENWIYQNTMNFQGASNNNGQVKDHGVPQQTLEGSMKLDMDGFGNQTNPIYIGTASREPSQSESSAAAPVVSSGLDAIEGPSISSQTPCENSRKQVGVSKGSENRVKGFREQIMDNLKDDRKRRSLERYGSVTSSAVSEDKGDATKKRRVERSRKMAEAKERNSTPPVPSDMQAVLKRCETLEKEVRSLKLNLSFMNRKDSEQTKQIEELQKQNEDLADEKERLLEEIERIVSETGKI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0870 527 MobiDBLite consensus disorder prediction 217 237 - -
Lele52g0870 527 PANTHER PROTEIN CYCLOPS 1 526 IPR040036 GO:0005634|GO:0036377|GO:0043565
Lele52g0870 527 MobiDBLite consensus disorder prediction 366 460 - -
Lele52g0870 527 MobiDBLite consensus disorder prediction 429 450 - -
Lele52g0870 527 MobiDBLite consensus disorder prediction 367 388 - -
Lele52g0870 527 MobiDBLite consensus disorder prediction 393 417 - -
Lele52g0870 527 Coils Coil 461 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0870 Lele-ChrLele52 5635949 5639143 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0870 52 5635949 5639143 Lele52g0870 52 5635949 5639143 ECH
Lele49g0854 49 5282130 5285753 Lele52g0870 52 5635949 5639143 hybridization
Lele50g0889 50 5592853 5596055 Lele52g0870 52 5635949 5639143 hybridization