Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0889 ATGGAAGGAAGGGGGTTTTCTGGGTTATATAATAACACAAGTGAAGAGTTGTTTCTGAAGACAGTGATGGAAAGTCCAATTGGAATGCCAGCACCAACCATGGAGATGTTAGGTTTCAAGGCTGTTTCTCAAAGTTTTCGCACAGATAGTGAAGAGCTCTTCAAACGCTGGCTAACAAATGGAGAGGGTGGTTACAGTTCAACAAGCGCAGGACATAACAGTCGATTATCACAGAGGATATCCACTGAACTAGCCAATTTGTCTAATCCACAACATGTTGGTGTAATTTCAGAGGAAAAAAGCAATGAAAAATTATATACACAAAATAACCTTATGGTCAATGATACTCCTGGTGATTTTAGTGAACCTCCTATGATCAGAGATGCTGCTGATAGAGAACTGCAAGCTGGTAACTTGTTTCTGGCAAAGGCTTGGTTTCTTAGTGATCAACGAATGACAAGAAGCCGTTCCTCGGAATTGAGGAGAAGGTATGTTGAATTGCAAAATGCTAAAGCAACACAAGGTATGGAAACCATACACCTGGTCCCTCAGGATGGTGGTGCTGAAACATTGAAAAAAGAAGGTTTGAATGTAAACGGTTTCGGTTACCTCTCTCGGGGCGAGCTTCCCAACCAGAAGGCGGCTACATTCATATCTCCATCAAACTCATCTTCATCTACCTTCAATACACCACAACAAATGGGAGATGCAGATAAAGTTTCATCTTGTGTGAGCATGCTAAAATGTTCAATAGAACGTAAGAGACTCAGCAACCATATAGAGAAAGAATCTGCAGAGGATAGCTCCAATAATGGTATATTTGGTGTTCATCAAGGTGATTTTGCCAAAACTATTTATATGGAAGGGCAAGAAAACTGGATTTATCAGAATCCAATGAATTTTCAAGGAGCATCTAATAATAATGGTCAAGTTAAGGACCATGGAGTTCCACAACAAACACTTGAAGGATCTATGAACCTTGACATGGATGGTTTCGGGAATCAGACAAACCCGATATACATTGGAACAGCTTCGCGAGAACCGTCTCAAAGCGAATCTTCTGCTGCTGCACCAGTAGTTTCCTCTGGTTTAGATGCAATTGAAGGTCCAAGCATCTCAAGTCAAACGCCATGTGAAAACTCATGGAAACAAGTGGGAGTGAGTAAAGGTTCAGAAAGTAGAGTCAAAGGTTTCAGAGAACAGATAATGGATAATTTGAAAGATGATCGGAAGAGGAGAAGTCTAGAAAGATATGCATCTGTAGCATCATCAGCTGTATCAGAGGACAAGGGCGATGCCACAAAAAAGCGGCGAGTGGAGCGATCAAGGAAAATGGCTGAGGCGAAGGAAAGGAATTCGACGCCGCCAGTTCCATCTGATATGCAAGTTGTGTTGAAGCGATGTGAAACCCTTGAGAAGGAAGTTAGATCCCTAAAACTTAATTTGTCCTTCATGAACAGGAAGGATTCAGAACAAACAAAGCAGATAGAGGAGCTTCAGAAGCAAAACGAAGATTTAGCAGACGAAAAGGAGCGCCTTTTAGAGGAAATTGAAAGGATTGTATCTGAAACTGGCAAGATTTAA 1584 0.4135 MEGRGFSGLYNNTSEELFLKTVMESPIGMPAPTMEMLGFKAVSQSFRTDSEELFKRWLTNGEGGYSSTSAGHNSRLSQRISTELANLSNPQHVGVISEEKSNEKLYTQNNLMVNDTPGDFSEPPMIRDAADRELQAGNLFLAKAWFLSDQRMTRSRSSELRRRYVELQNAKATQGMETIHLVPQDGGAETLKKEGLNVNGFGYLSRGELPNQKAATFISPSNSSSSTFNTPQQMGDADKVSSCVSMLKCSIERKRLSNHIEKESAEDSSNNGIFGVHQGDFAKTIYMEGQENWIYQNPMNFQGASNNNGQVKDHGVPQQTLEGSMNLDMDGFGNQTNPIYIGTASREPSQSESSAAAPVVSSGLDAIEGPSISSQTPCENSWKQVGVSKGSESRVKGFREQIMDNLKDDRKRRSLERYASVASSAVSEDKGDATKKRRVERSRKMAEAKERNSTPPVPSDMQVVLKRCETLEKEVRSLKLNLSFMNRKDSEQTKQIEELQKQNEDLADEKERLLEEIERIVSETGKI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0889 527 MobiDBLite consensus disorder prediction 367 387 - -
Lele50g0889 527 PANTHER PROTEIN CYCLOPS 1 526 IPR040036 GO:0005634|GO:0036377|GO:0043565
Lele50g0889 527 MobiDBLite consensus disorder prediction 429 450 - -
Lele50g0889 527 MobiDBLite consensus disorder prediction 366 387 - -
Lele50g0889 527 Coils Coil 461 523 - -
Lele50g0889 527 MobiDBLite consensus disorder prediction 419 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0889 Lele-ChrLele50 5592853 5596055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0889 50 5592853 5596055 Lele50g0889 50 5592853 5596055 ECH
Lele50g0889 50 5592853 5596055 Lele51g0870 51 5340085 5344111 hybridization
Lele50g0889 50 5592853 5596055 Lele52g0870 52 5635949 5639143 hybridization