Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0843 ATGCTCTCCGACGTCGATTCCCCGTCACCGTCCTTCGCCAGGAAACAAACCCGCACCTCCTCATCTCCTTCCTTACTCATCCAATGCGACGCCGAGGTCGTCGGTTCCGGCTCCGGCGGATGTGTAATCGCCGGAGTCCTAGCAAAAGCCGGTTTCAAAGTTCTGGTCTTGGAGAAAGGAAACTACTCTGCAAGAAACAATCTCACTCTTCTCGGAGGACCAAGCATGGATCAAAGGTACCTTTCTAATGGCCTAATCGCTACTGATGATATGGGCATGTTCATACTCGCCAGATCAACGGTCGGCGGAGGATCTGCAATTAACTGGTCGGCATGTATCAAAACCCCAAAACATGTCTGCAAGGAATGGAGCCGACAACACGGGCTTGAACTTTTCGAGAACAAATTATACAGAGAAGCTTTAGATGTTGTCTCAGAGAAGATGGGAGTTCAATCTGAAATCAACGAAGAAGGTTTCAACAATGCTGTTCTAAGAATAGGTTGTCAAGAAATGGGTTACCCAGTGAGCACGATTCCTCGGAATTCTCCACCTGATCATTACTGTGGCTGGTGTGGTATGGGCTGTAAAGATGGCAAGAAGAGGGGAACATCAGAGACATGGCTTGTCGACGTAGTTAAATCCGGCAACGGAGCTATTCTTCCGAGCTGCACCGCCATTAAAGTCGTCCACAAGAAACACAAAGACAAAGATCGGAAAACAGCAAAAGGAGTAGTTTTTGAGTATGAATACAAAGGAGTTAAAGACATTTGTATGGTTGAATCCAAGGTTACAATTGTCGCATGTGGAGCATTATGTACTCCAGAATTGCTCAAAAGAAGTGTGTTGAAGAACAAAAACATAGGAAAACACTTACATCTTCATCCAGTAACAATGGCTTGGGGATATTTCCCAAACAAACCTTCTCCATCTAATGATGATTCCGAGGTTTGGCCTGAGGAACATAAAAAGAGCTATGAAGGAGGGATAATGACAGCAATGGATAGAGAAGTGCTGAGGATTCTTGCGGCAGCTGGGGCTGAAGAAATTGGGACACATAATGATAAAGGAAGGAGCTTGAATGTGAAGAAGGTGAGTTATCATGAGTTTCAGAAGTTTGTGAAGGAGAGTTCAAGGACGTTGACAGACCTGTCAACTCCATTATGCTCAGCTCATCAGATGGGGGCGAATCCGGCGGAATCCTCCGTGAATCCGATGGGGGAGACATGGGAGGTGGAGGGACTTTATGTGGCAGATTCAAGTGTGTTCCCAACAGCTTTGGGTATGAATCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCACGATCTGTGCTTGAAGTTCTCAGAACGAAGAAATCTAGATAG 1368 0.4591 MLSDVDSPSPSFARKQTRTSSSPSLLIQCDAEVVGSGSGGCVIAGVLAKAGFKVLVLEKGNYSARNNLTLLGGPSMDQRYLSNGLIATDDMGMFILARSTVGGGSAINWSACIKTPKHVCKEWSRQHGLELFENKLYREALDVVSEKMGVQSEINEEGFNNAVLRIGCQEMGYPVSTIPRNSPPDHYCGWCGMGCKDGKKRGTSETWLVDVVKSGNGAILPSCTAIKVVHKKHKDKDRKTAKGVVFEYEYKGVKDICMVESKVTIVACGALCTPELLKRSVLKNKNIGKHLHLHPVTMAWGYFPNKPSPSNDDSEVWPEEHKKSYEGGIMTAMDREVLRILAAAGAEEIGTHNDKGRSLNVKKVSYHEFQKFVKESSRTLTDLSTPLCSAHQMGANPAESSVNPMGETWEVEGLYVADSSVFPTALGMNPMVTVQAIAYCTARSVLEVLRTKKSR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0843 455 Pfam GMC oxidoreductase 332 440 IPR007867 GO:0016614
Lele52g0843 455 SUPERFAMILY FAD/NAD(P)-binding domain 28 447 IPR036188 -
Lele52g0843 455 Gene3D - 13 455 IPR036188 -
Lele52g0843 455 Pfam GMC oxidoreductase 33 296 IPR000172 GO:0016614|GO:0050660
Lele52g0843 455 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 18 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0843 Lele-ChrLele52 5408885 5410503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0843 319 449 Acyl Lipid Metabolism Gene Families AT4G19380 58.394 3.19e-40 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0843 52 5408885 5410503 Lele52g0843 52 5408885 5410503 ECH
Lele49g0819 49 5022809 5031006 Lele52g0843 52 5408885 5410503 hybridization
Lele50g0856 50 5348052 5350039 Lele52g0843 52 5408885 5410503 hybridization