Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0708 ATGAAAAGCAGAGCGCCACACCCCACACGCGATTGTTATACGGGGAGAACAGGTTTCCAGAATAGTTGCAAGGAAAAGCAGTCGAATCAGGCGGCATTCCAAGAAAAAGCAACAACAGCGCCAAAAGCCATGGCGGCACCTGAATCTCCTGTTTGTTATGTCGGTGTCGCCAGGCAGTCCGCTGCTTTCCGCCTCATGAAGCAAATGGTGCCTCTCTTTGTCTGTTTTGGCTGGGAAGAAGGAGAAGGTCTAGGCAAAGACAAACAGGGAATCAAAGGATATGTTCGAGTCCAAAACAAGCAGGATACTGTTGGTATCGGCTTAGAGAAGCCAAACAACTGGGCATTTGACACTACGCAATTTGATAGTATTCTTAAGAGGTTGAAAGTGCAAGCAGTGCAATCCAATGACACAGGCATAGAGAAAAAAACCACTAAGGTGGAAACTGAGACTGGTGTCGGTGGTGATCAACCTGATACAGTTTCTAAAACTACTAGACCTCAAGGAAGATACAAGAGAAGAGAGAGGGGGAAGCTTGTCTCTGAATATTCTTTGAAGGATCTTGAAGGAATACTTGTTAAGAAGGGTGAAGTGTCAAGATGCAATGATGATTCTGATGCTGAGCTGGACGTTTCAAAGACATCTGATAGTCAATCTGATAGTCAATACTTTCAAGTTGAAGATATCAAAGTTTGTGATATCCCTCCGGACTGGTGGGGCCACAAGTTTGGATTTGTCTCTGGTGGTCTTCTTGGAGCAGAGTCAAGAAGGAGAAGGTTAGCCGAGAACACTAATAATACTGAAAGAATTGCATTTCATGAAGATGATCAAGAGAAGCTCTACAAGCTGGTCCAAGACAAATCCACAACTGGAAAGCAAGGATTGGGCATCAAAGACAGGACCAAGAAAGTTGCTGGCTGCTACTTTGAGGGTAAAAAGACCACATTTAATGATAGTGATGACGAGGACGACGATTCTGCTGATATTGGTTCTGAGGAAAAACAATCTGGTGACATAATTAAGGAAGAAAAGACTGATGGATCCAGAGTGAAGTTGAAAAAGCTTTGTAGAAAGATTTTACAGAGGGTGCCTGGAGAATCATTGAAACTGAAACAGCTTAAAGTTATTATTGACGAACATTCATCTTCTGTTTTCGCTGATTTCTCTTCCAAGAGAGATGCAGTTGCTTACTTGAAGCAAAAGCTGGACGGGAGTAAAAAGTTTTGTATTGAAGGAAGAAGAGTGAGATTGGCATCTAAGAGATGCTGA 1269 0.4287 MKSRAPHPTRDCYTGRTGFQNSCKEKQSNQAAFQEKATTAPKAMAAPESPVCYVGVARQSAAFRLMKQMVPLFVCFGWEEGEGLGKDKQGIKGYVRVQNKQDTVGIGLEKPNNWAFDTTQFDSILKRLKVQAVQSNDTGIEKKTTKVETETGVGGDQPDTVSKTTRPQGRYKRRERGKLVSEYSLKDLEGILVKKGEVSRCNDDSDAELDVSKTSDSQSDSQYFQVEDIKVCDIPPDWWGHKFGFVSGGLLGAESRRRRLAENTNNTERIAFHEDDQEKLYKLVQDKSTTGKQGLGIKDRTKKVAGCYFEGKKTTFNDSDDEDDDSADIGSEEKQSGDIIKEEKTDGSRVKLKKLCRKILQRVPGESLKLKQLKVIIDEHSSSVFADFSSKRDAVAYLKQKLDGSKKFCIEGRRVRLASKRC 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0708 422 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 50 414 - -
Lele52g0708 422 MobiDBLite consensus disorder prediction 1 40 - -
Lele52g0708 422 MobiDBLite consensus disorder prediction 146 173 - -
Lele52g0708 422 MobiDBLite consensus disorder prediction 318 339 - -
Lele52g0708 422 Pfam G-patch domain 60 108 IPR000467 GO:0003676
Lele52g0708 422 SMART G-patch_5 56 109 IPR000467 GO:0003676
Lele52g0708 422 ProSiteProfiles G-patch domain profile. 77 111 IPR000467 GO:0003676
Lele52g0708 422 MobiDBLite consensus disorder prediction 14 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0708 Lele-ChrLele52 4447669 4452628 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0708 52 4447669 4452628 Lele52g0708 52 4447669 4452628 ECH
Lele49g0683 49 4139814 4143292 Lele52g0708 52 4447669 4452628 hybridization
Lele50g0715 50 4397757 4401284 Lele52g0708 52 4447669 4452628 hybridization