Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0715 ATGGCGGCACCTCAATCTCCTGTTTGTTATGTCGGTGTCGCCAGGCAGTCCGCTGCTTTCCGCCTCATGAAGCAAATGGGCTGGGAAGAAGGAGAAGGTCTAGGCAAAGACAAACAGGGAATCAAAGGATATGTTCGAGTCCAAAACAAGCAGGATACTGTTGGTATCGGCTTAGAGAAGCCAAACAACTGGGCATTTGACACTACTCAATTTGATAGTATTCTTAAGAGGTTGAAAGTGCAAGCAGTGCAATCCAATTACAGAGGCATAGATAGAAAAACCACTAAGGTGGAAACTGAGACTAGTGTCGGTGGTGATCAACCTGATACAGTTTCTAAAACTACTAGACCTCAAGGAAGATACAAGAGAAGGGAGAGGGGGAAGCTTGTCTCTGAATATTCTTTGAAGGATCTTGAAGGAATATTTGTTAAGAAGGGTGAAGTGTCAAGATGCAATGATGATTCTGATGCTGAGCTGGACGTGTCAAAGACATCTGACAGTCAATACTTTCAAGTTGAAGAAATCAAAGTTTGTGATAGCCCTCCGGACTGGTGGGGCCACAAGTTTGGATTTGTCTCTGGGGGTCTTCTTGGAGCAGAGTCAAGAAGGAAAAGGTTAGCCGAGAACACTGATAATAGTGAAAGAACTGCATTTCATGAAGATGATCAAGAGAAGCTCTACAAGCTGGTCCAAGACAAATCCACAACTGGAAAGCAAGGACTGGGCATCAAAGACAGGACCAAGAAAGTTGCTGGCTGCTACTTTGAGGGTAAAAAGACCACATTTAATGATAATGATGATGACAACGGTGATTCTGCTGATATTGGTTCTGAGGAAAACCAATCTGGTGACATAATTAAGGAAGAAAAGACTGATGGATCCAGAGTGAAGTTGAAAAAGCTTTGTAGAAAGATTTTACAGAGGGTGCCTGGAGAATCATTGAAACTGAAACAGCTTAAAGTTATTATTGACGAACATTCATCTTCTGTTTTCACTGATTTCTCTTCCAAGAGAGATGCAGTTGCTTACTTGAAGCAAAAGCTGGAAGGGAGCAAAAAGTTTTGTATTGAAGGAAGAAGAGTGAGATTGGCATCTAAGAGATGCTGA 1107 0.4219 MAAPQSPVCYVGVARQSAAFRLMKQMGWEEGEGLGKDKQGIKGYVRVQNKQDTVGIGLEKPNNWAFDTTQFDSILKRLKVQAVQSNYRGIDRKTTKVETETSVGGDQPDTVSKTTRPQGRYKRRERGKLVSEYSLKDLEGIFVKKGEVSRCNDDSDAELDVSKTSDSQYFQVEEIKVCDSPPDWWGHKFGFVSGGLLGAESRRKRLAENTDNSERTAFHEDDQEKLYKLVQDKSTTGKQGLGIKDRTKKVAGCYFEGKKTTFNDNDDDNGDSADIGSEENQSGDIIKEEKTDGSRVKLKKLCRKILQRVPGESLKLKQLKVIIDEHSSSVFTDFSSKRDAVAYLKQKLEGSKKFCIEGRRVRLASKRC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0715 368 ProSiteProfiles G-patch domain profile. 15 61 IPR000467 GO:0003676
Lele50g0715 368 MobiDBLite consensus disorder prediction 96 123 - -
Lele50g0715 368 Pfam G-patch domain 17 58 IPR000467 GO:0003676
Lele50g0715 368 SMART G-patch_5 13 59 IPR000467 GO:0003676
Lele50g0715 368 MobiDBLite consensus disorder prediction 100 115 - -
Lele50g0715 368 MobiDBLite consensus disorder prediction 264 283 - -
Lele50g0715 368 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 14 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0715 Lele-ChrLele50 4397757 4401284 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0715 50 4397757 4401284 Lele50g0715 50 4397757 4401284 ECH
Lele50g0715 50 4397757 4401284 Lele51g0702 51 4230824 4235371 hybridization
Lele50g0715 50 4397757 4401284 Lele52g0708 52 4447669 4452628 hybridization