Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0673 ATGAATACGCCGCCTTCTTCTTCTTCTAATCCCAATGAATGTCCTCTTCCTAAATATGACTCCAACATAGTCACCATTAATGTAGGTGGCCAATTCTTCCAAACCACAAAGCAGACTCTCAATTCCGCTGGCCCCAAGTCCTTCTTCGCCAAAATCGCCCAATTTCCCTCTGACTCCTTCATCGATAGGGATCCTGAGTTGTTCGCTGTCCTCCTTTCGGTTCTGCGAACAGGTAATCTTCCTTCCAAAGCCAAGGCTTACGATCTTCAAGATCTGATTTCTGAGTCCCAATTTTACGGCATCGAGCACACACTCAGGAATTCCCTATCCGGTCCTTCTCAATTCGAGCCCTTCAACCTCCAGAAATCGATTATCTTACATCTTAATGGACGAGATACACCCTCCGCCATCGCCTCCTCAACGTTCGGCTCGGTTCATGTGGCGCATGGCAGTAAGATAACGTCCTTTGATTGGTCCCTTCGACGCAAGTCCACTTTCTTGACTCAGTTCATGGCGGTCGATTCTCTATTAGCCCTCTCCGATTCAGTGGTGGCTGCCGGTGCCCATGACTATTCGGGGTTGCAAATTATTGATTTGAAAAGCAAAGTAATCAAAACGACCTTAGACTGGGAGAACGTGACCAGGTCTGGTTCAACAGTTCTAGCCATTGGATCTTCGCCGGAACACCTATTTGCGAGTTTCGAATCAGGTCGCCGCAATTCAAATTCCATAATGGTATATGATTTAAACACTTGTAACCCAGTTACAGAAATCGCTCACAATGAGATTTTTGGCGCCGATATCGATTCCGCGATCCCAGCAACAAAATTAAAATGGGCGTCGGGTTACAACTTGCTCATGGCATCTGGGTCTCATAGTGGTCCTTCGGGTGTATCTGGCAACTTAAGATTATGGGATGTTAGGTCCGGGAATGTTGTTTGGGAGATGAAGGAGAAGACAGATTGTTTTGCGGACGTGACAGTTTCAGATAACTTGTCAGTGATCTTCAAGATTGGGGTGCATTCTGGGGAGGCATTTTTCGTGGATATGCGTAATTTGAGTTCTGGGAATTCCTGGGTTTGTCTTGGTGACAATAAGAAAGTGTTGCATGGGAAGAAGGAAGGCGTAGGATGCAAGGTTGAAGGTCAAGGGAATCAGGTGTTCTGCAGTAAGGGTGGAGACATAGAAATGTGGTCAGAGGTTATAATGGGCTCTGCAAAGAGAGGGGATGAGAAGTTAGATAATAGGATATTCAAGAAGAACTTTTTGGGCAGAGTGAAGGACACTGGAGGTTCTAAGATCTCCAATTTGGCCTTTGGGGGGAACAAGATGTTCTTGACAAGGAAGGATCAGCAATTTGTTGAGGTTTGGCAGAGTTCTACTGTGGAACTTTAA 1395 0.4588 MNTPPSSSSNPNECPLPKYDSNIVTINVGGQFFQTTKQTLNSAGPKSFFAKIAQFPSDSFIDRDPELFAVLLSVLRTGNLPSKAKAYDLQDLISESQFYGIEHTLRNSLSGPSQFEPFNLQKSIILHLNGRDTPSAIASSTFGSVHVAHGSKITSFDWSLRRKSTFLTQFMAVDSLLALSDSVVAAGAHDYSGLQIIDLKSKVIKTTLDWENVTRSGSTVLAIGSSPEHLFASFESGRRNSNSIMVYDLNTCNPVTEIAHNEIFGADIDSAIPATKLKWASGYNLLMASGSHSGPSGVSGNLRLWDVRSGNVVWEMKEKTDCFADVTVSDNLSVIFKIGVHSGEAFFVDMRNLSSGNSWVCLGDNKKVLHGKKEGVGCKVEGQGNQVFCSKGGDIEMWSEVIMGSAKRGDEKLDNRIFKKNFLGRVKDTGGSKISNLAFGGNKMFLTRKDQQFVEVWQSSTVEL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0673 464 Gene3D Potassium Channel Kv1.1; Chain A 17 113 IPR011333 -
Lele52g0673 464 Pfam BTB/POZ domain 24 104 IPR003131 GO:0051260
Lele52g0673 464 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 19 461 IPR045068 -
Lele52g0673 464 CDD BTB_POZ_KCTD-like 24 99 - -
Lele52g0673 464 SUPERFAMILY POZ domain 21 106 IPR011333 -
Lele52g0673 464 Gene3D - 144 464 IPR015943 GO:0005515
Lele52g0673 464 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 157 450 IPR011047 -
Lele52g0673 464 SMART BTB_4 22 116 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0673 Lele-ChrLele52 4259579 4260973 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0673 52 4259579 4260973 Lele52g0673 52 4259579 4260973 ECH
Lele50g0682 50 4196879 4198252 Lele52g0673 52 4259579 4260973 hybridization