Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0682 ATGAATACTCCGCCTTTTTCTTCTTCTAATCCCAATGAATGTCCTCTTGCTAAATCTGACTCCAACATAGTCACCATTAATGTAGGTGGCCAATTCTTCCAAACCACAAAGCAGACTCTCAATTCCGCTGGCCCCAAGTCCTTCTTCGCCAAAATCGCCCAATTTCCCTCTGACACCTTCATCGACAGGGATCCTGAGTTGTTCGCTGTCCTCCTTTCGCTTCTACGAACAGGTAATCTTCCTTCCAAAGCCAAGGCTTACGATCTTCAAGATCTGATTTCTGAGTCCCAATTTTACGGCATCGAGCACACACTAAGGAATTCCCTATCCGATCCTTCTCAGTTCGAGCCCTTCAACCTCCAGAAATCGATTATTTTACCTCTTAATGGACGAGATACACCCTCCGCCATCGCCGCCTCAACGTTCGGCTCGGTTCATGTGGCGCATGGCAGTAAGATAACGTCCTTTGATTGGTCCCTTCGACGCAAGTCCACTTTCTTGACTCAGTTCATGGCGGTCGATTCTCTATTAGCCCTCTCCGATTCAGTGGTGGCTGTCGGTGCCCATGACTATTCGGGGTTGCAAATTATTGATTTGAAGAGCAAAGTAATCAAAACGACCTTAGACTGGGAGAACGTGACCAGGTCTGGTTCAACAGTTCTAGCCATTGGATCTTCGCCGGAACACCTATTTGCGAGTTTCGAATCAGGCCGCCGCAATTCAAATTCCATAATGGTATATGATTTAAACACTTGTAACCCAGTTACAGAAATCGCTCACAATGAGATTTTTGGCGCCGATATCGATTCCGCGATCCCAGCAACAAAATTAAAATGGGCGTCGGGTTACAACTTGCTCATGGCATCTGGGTCTCATAGTGGTCCTTCGGGTGTATCTGGCAACTTAAGATTATGGGATGTGAGGTCCGGGAATGTTGTTTGGGAGATGAAGGAGAAGACAGATTGTTTTGCGGACGTGACAGTTTCAGATAACTTGTCAGTGATCTTCAAGATTGGGGTGCATTCTGGGGAGGCATTTTTCGTGGATATGCGTAATTTGAGTTCTGGGAATTCCTGGGTTTGTCTTGGTGACAATAAGAAAGTGTTGAATGGGAAGAAGGAAGGCATAGGATGCAAGGTTGAAGATCAAGGGAATCAGGTGTTCTGCAGCAAGGGTGGAGACATAGAAATGTGGTCAGAGGTTATAATGGGCTCTGCAAAGAGAGGGGATGAGAAGTTAGATAATAGGATATTCAAGAAGAACTTGTTGGGCAGAGTTAAGGACACTGGAGGTTCCAAGATCACCAATTTGGCCTTTGGGGGGAACAAAATGTTCTTGACAAGGAAGGATCAGCAATTTGTTGAGGTTTGGTAG 1374 0.4592 MNTPPFSSSNPNECPLAKSDSNIVTINVGGQFFQTTKQTLNSAGPKSFFAKIAQFPSDTFIDRDPELFAVLLSLLRTGNLPSKAKAYDLQDLISESQFYGIEHTLRNSLSDPSQFEPFNLQKSIILPLNGRDTPSAIAASTFGSVHVAHGSKITSFDWSLRRKSTFLTQFMAVDSLLALSDSVVAVGAHDYSGLQIIDLKSKVIKTTLDWENVTRSGSTVLAIGSSPEHLFASFESGRRNSNSIMVYDLNTCNPVTEIAHNEIFGADIDSAIPATKLKWASGYNLLMASGSHSGPSGVSGNLRLWDVRSGNVVWEMKEKTDCFADVTVSDNLSVIFKIGVHSGEAFFVDMRNLSSGNSWVCLGDNKKVLNGKKEGIGCKVEDQGNQVFCSKGGDIEMWSEVIMGSAKRGDEKLDNRIFKKNLLGRVKDTGGSKITNLAFGGNKMFLTRKDQQFVEVW 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0682 457 Gene3D - 130 371 IPR015943 GO:0005515
Lele50g0682 457 SMART BTB_4 22 116 IPR000210 GO:0005515
Lele50g0682 457 Gene3D Potassium Channel Kv1.1; Chain A 15 115 IPR011333 -
Lele50g0682 457 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 157 440 IPR011047 -
Lele50g0682 457 SUPERFAMILY POZ domain 21 106 IPR011333 -
Lele50g0682 457 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 18 457 IPR045068 -
Lele50g0682 457 CDD BTB_POZ_KCTD-like 24 99 - -
Lele50g0682 457 Pfam BTB/POZ domain 24 104 IPR003131 GO:0051260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0682 Lele-ChrLele50 4196879 4198252 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0682 50 4196879 4198252 Lele50g0682 50 4196879 4198252 ECH
Lele50g0682 50 4196879 4198252 Lele51g0669 51 4053887 4054674 hybridization
Lele50g0682 50 4196879 4198252 Lele52g0673 52 4259579 4260973 hybridization