Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0648 ATGGGGAAGATATACCCTGATGAGATTGAGAAACCCAGCATGATGAGTAGTAAAAGAGAAACATACACAGTATGGATGAAATCACTCCTGTTCCATTCTAATGGCTGCACCGTCTACAACTCCACCGGCGACATCGTTTATCGGGTCCATAACTACGACTCAAAGGCTACCAGAGAAGTCAACCTCATGGATCTCGGAGGCACAGTTCTCTGTACCATACATAAGGTAAGTGTGTGTGTGGGTAGAAAACTAGGTTTTGGATGCTGGGAAGGGAGGAGGAAGGAGAAGAGGTGGTTCCAGGTGAAGAGGTGCATGAAGGGAAAAGGAGAATGTGAAATGAGAGTGGGGAACCAAAAGTACAAGATAGTTGGAATGGGAAGATGCAAAGCAGCGTTTGGGATCATGAACAGGGATGGACAAGTTGTTGCAGAGGTAAAGCAGAAGGAATCGTGGTCAGGAGTAGTGCTGGGTGATGATGTGGTAACGTTGCAAGTGGAGGCCAATACGGATCACTCACTTATAATGGCTTTCGTCACTGTCTATGGATTAATCCGAGGAATAATGTAG 567 0.4603 MGKIYPDEIEKPSMMSSKRETYTVWMKSLLFHSNGCTVYNSTGDIVYRVHNYDSKATREVNLMDLGGTVLCTIHKVSVCVGRKLGFGCWEGRRKEKRWFQVKRCMKGKGECEMRVGNQKYKIVGMGRCKAAFGIMNRDGQVVAEVKQKESWSGVVLGDDVVTLQVEANTDHSLIMAFVTVYGLIRGIM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0648 188 PANTHER - 20 184 IPR007612 -
Lele52g0648 188 Pfam LURP-one-related 12 180 IPR007612 -
Lele52g0648 188 Gene3D - 9 186 IPR038595 -
Lele52g0648 188 SUPERFAMILY Tubby C-terminal domain-like 13 184 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0648 Lele-ChrLele52 4110947 4111588 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0648 52 4110947 4111588 Lele52g0648 52 4110947 4111588 ECH
Lele49g0627 49 3805774 3806500 Lele52g0648 52 4110947 4111588 hybridization
Lele50g0656 50 4022727 4023364 Lele52g0648 52 4110947 4111588 hybridization